Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SORBS3O60504 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SORBS3O60504 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SORBS3O60504 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORBS3O60504 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORBS3O60504 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORBS3O60504 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORBS3O60504 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORBS3O60504 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORBS3O60504 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SORBS3O60504 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORBS3O60504 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORBS3O60504 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.29■□□□□ 0.68
SORBS3O60504 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.29■□□□□ 0.68
SORBS3O60504 PAWRP1-201ENST00000451083 565 ntBASIC19.29■□□□□ 0.68
SORBS3O60504 AC074386.1-202ENST00000463561 864 ntBASIC19.29■□□□□ 0.68
SORBS3O60504 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.29■□□□□ 0.68
SORBS3O60504 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.29■□□□□ 0.68
SORBS3O60504 ACTL9-202ENST00000612068 1252 ntBASIC19.29■□□□□ 0.68
SORBS3O60504 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORBS3O60504 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORBS3O60504 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORBS3O60504 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORBS3O60504 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SORBS3O60504 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.28■□□□□ 0.68
SORBS3O60504 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SORBS3O60504 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SORBS3O60504 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.28■□□□□ 0.68
SORBS3O60504 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SORBS3O60504 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.28■□□□□ 0.68
SORBS3O60504 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SORBS3O60504 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
SORBS3O60504 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.28■□□□□ 0.68
SORBS3O60504 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SORBS3O60504 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SORBS3O60504 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.28■□□□□ 0.68
SORBS3O60504 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SORBS3O60504 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
SORBS3O60504 METTL21AP1-201ENST00000438852 635 ntBASIC19.28■□□□□ 0.68
SORBS3O60504 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SORBS3O60504 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.28■□□□□ 0.68
SORBS3O60504 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
SORBS3O60504 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SORBS3O60504 AC027796.2-201ENST00000575326 344 ntBASIC19.28■□□□□ 0.68
SORBS3O60504 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.28■□□□□ 0.68
SORBS3O60504 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SORBS3O60504 AC091812.2-201ENST00000619081 385 ntBASIC19.28■□□□□ 0.68
SORBS3O60504 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SORBS3O60504 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SORBS3O60504 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SORBS3O60504 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SORBS3O60504 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SORBS3O60504 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.28■□□□□ 0.68
SORBS3O60504 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SORBS3O60504 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.27■□□□□ 0.68
SORBS3O60504 ELL2P1-201ENST00000413990 1906 ntBASIC19.27■□□□□ 0.68
SORBS3O60504 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SORBS3O60504 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SORBS3O60504 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SORBS3O60504 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SORBS3O60504 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.27■□□□□ 0.68
SORBS3O60504 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SORBS3O60504 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SORBS3O60504 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SORBS3O60504 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SORBS3O60504 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.27■□□□□ 0.68
SORBS3O60504 FAM185BP-201ENST00000443595 716 ntBASIC19.27■□□□□ 0.68
SORBS3O60504 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SORBS3O60504 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.27■□□□□ 0.68
SORBS3O60504 YBX1P5-201ENST00000509441 847 ntBASIC19.27■□□□□ 0.68
SORBS3O60504 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.27■□□□□ 0.68
SORBS3O60504 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SORBS3O60504 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.27■□□□□ 0.68
SORBS3O60504 AC007064.4-201ENST00000637740 555 ntBASIC19.27■□□□□ 0.68
SORBS3O60504 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SORBS3O60504 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SORBS3O60504 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SORBS3O60504 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
SORBS3O60504 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SORBS3O60504 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SORBS3O60504 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
SORBS3O60504 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
SORBS3O60504 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SORBS3O60504 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SORBS3O60504 KRT18P28-201ENST00000453838 1332 ntBASIC19.26■□□□□ 0.67
SORBS3O60504 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SORBS3O60504 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SORBS3O60504 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SORBS3O60504 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SORBS3O60504 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SORBS3O60504 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SORBS3O60504 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SORBS3O60504 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SORBS3O60504 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SORBS3O60504 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SORBS3O60504 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SORBS3O60504 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SORBS3O60504 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SORBS3O60504 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SORBS3O60504 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms