Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF3O43395 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF3O43395 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.71■□□□□ 0.75
PRPF3O43395 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.71■□□□□ 0.75
PRPF3O43395 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.71■□□□□ 0.75
PRPF3O43395 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.71■□□□□ 0.75
PRPF3O43395 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.71■□□□□ 0.75
PRPF3O43395 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF3O43395 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PRPF3O43395 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF3O43395 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF3O43395 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
PRPF3O43395 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF3O43395 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF3O43395 AC105020.1-201ENST00000435356 2205 ntBASIC19.71■□□□□ 0.75
PRPF3O43395 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF3O43395 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF3O43395 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF3O43395 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF3O43395 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF3O43395 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRPF3O43395 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF3O43395 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF3O43395 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PRPF3O43395 AC002310.6-201ENST00000624451 1377 ntBASIC19.7■□□□□ 0.74
PRPF3O43395 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF3O43395 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF3O43395 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.7■□□□□ 0.74
PRPF3O43395 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF3O43395 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PRPF3O43395 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF3O43395 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF3O43395 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF3O43395 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.7■□□□□ 0.74
PRPF3O43395 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF3O43395 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.7■□□□□ 0.74
PRPF3O43395 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.7■□□□□ 0.74
PRPF3O43395 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.7■□□□□ 0.74
PRPF3O43395 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.7■□□□□ 0.74
PRPF3O43395 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.7■□□□□ 0.74
PRPF3O43395 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF3O43395 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF3O43395 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF3O43395 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF3O43395 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PRPF3O43395 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF3O43395 TUBB8P12-201ENST00000308911 1335 ntBASIC19.7■□□□□ 0.74
PRPF3O43395 TUBB7P-202ENST00000428444 1305 ntBASIC19.7■□□□□ 0.74
PRPF3O43395 TUBB8P7-204ENST00000567960 1332 ntBASIC19.7■□□□□ 0.74
PRPF3O43395 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF3O43395 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF3O43395 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.7■□□□□ 0.74
PRPF3O43395 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRPF3O43395 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF3O43395 AC005915.1-201ENST00000624912 2018 ntBASIC19.69■□□□□ 0.74
PRPF3O43395 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
PRPF3O43395 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF3O43395 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PRPF3O43395 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF3O43395 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PRPF3O43395 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF3O43395 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF3O43395 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF3O43395 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF3O43395 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PRPF3O43395 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PRPF3O43395 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.69■□□□□ 0.74
PRPF3O43395 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.69■□□□□ 0.74
PRPF3O43395 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.69■□□□□ 0.74
PRPF3O43395 UNC93B6-202ENST00000528242 690 ntBASIC19.69■□□□□ 0.74
PRPF3O43395 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.69■□□□□ 0.74
PRPF3O43395 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.69■□□□□ 0.74
PRPF3O43395 REXO1L3P-201ENST00000622202 1288 ntBASIC19.69■□□□□ 0.74
PRPF3O43395 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.69■□□□□ 0.74
PRPF3O43395 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.69■□□□□ 0.74
PRPF3O43395 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF3O43395 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF3O43395 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF3O43395 AL021920.2-201ENST00000624828 1351 ntBASIC19.69■□□□□ 0.74
PRPF3O43395 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
PRPF3O43395 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF3O43395 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF3O43395 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF3O43395 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PRPF3O43395 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF3O43395 AD000864.1-201ENST00000624076 2295 ntBASIC19.68■□□□□ 0.74
PRPF3O43395 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF3O43395 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF3O43395 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF3O43395 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF3O43395 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF3O43395 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PRPF3O43395 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.68■□□□□ 0.74
PRPF3O43395 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PRPF3O43395 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.68■□□□□ 0.74
PRPF3O43395 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.68■□□□□ 0.74
PRPF3O43395 AC108073.2-201ENST00000464002 357 ntBASIC19.68■□□□□ 0.74
PRPF3O43395 RNA5SP415-201ENST00000517246 115 ntBASIC19.68■□□□□ 0.74
PRPF3O43395 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
PRPF3O43395 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms