Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SRGAP3O43295 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SRGAP3O43295 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
SRGAP3O43295 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SRGAP3O43295 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SRGAP3O43295 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.26■□□□□ 0.99
SRGAP3O43295 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRGAP3O43295 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SRGAP3O43295 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SRGAP3O43295 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRGAP3O43295 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SRGAP3O43295 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SRGAP3O43295 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRGAP3O43295 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.26■□□□□ 0.99
SRGAP3O43295 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.26■□□□□ 0.99
SRGAP3O43295 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.26■□□□□ 0.99
SRGAP3O43295 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.26■□□□□ 0.99
SRGAP3O43295 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRGAP3O43295 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRGAP3O43295 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRGAP3O43295 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRGAP3O43295 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRGAP3O43295 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRGAP3O43295 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRGAP3O43295 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SRGAP3O43295 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SRGAP3O43295 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC21.25■□□□□ 0.99
SRGAP3O43295 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRGAP3O43295 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SRGAP3O43295 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SRGAP3O43295 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC21.25■□□□□ 0.99
SRGAP3O43295 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC21.25■□□□□ 0.99
SRGAP3O43295 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SRGAP3O43295 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SRGAP3O43295 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC21.25■□□□□ 0.99
SRGAP3O43295 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC21.25■□□□□ 0.99
SRGAP3O43295 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
SRGAP3O43295 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.25■□□□□ 0.99
SRGAP3O43295 AC007967.2-201ENST00000432613 625 ntBASIC21.25■□□□□ 0.99
SRGAP3O43295 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.25■□□□□ 0.99
SRGAP3O43295 PRSS29P-201ENST00000440800 595 ntBASIC21.25■□□□□ 0.99
SRGAP3O43295 VN2R19P-201ENST00000442399 1052 ntBASIC21.25■□□□□ 0.99
SRGAP3O43295 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SRGAP3O43295 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.25■□□□□ 0.99
SRGAP3O43295 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21.25■□□□□ 0.99
SRGAP3O43295 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.25■□□□□ 0.99
SRGAP3O43295 AC010654.1-201ENST00000615722 808 ntBASIC21.25■□□□□ 0.99
SRGAP3O43295 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC21.25■□□□□ 0.99
SRGAP3O43295 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRGAP3O43295 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRGAP3O43295 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SRGAP3O43295 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.25■□□□□ 0.99
SRGAP3O43295 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRGAP3O43295 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SRGAP3O43295 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SRGAP3O43295 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRGAP3O43295 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRGAP3O43295 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SRGAP3O43295 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC21.24■□□□□ 0.99
SRGAP3O43295 AC002310.6-201ENST00000624451 1377 ntBASIC21.24■□□□□ 0.99
SRGAP3O43295 AC092068.3-201ENST00000587894 2016 ntBASIC21.24■□□□□ 0.99
SRGAP3O43295 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SRGAP3O43295 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SRGAP3O43295 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SRGAP3O43295 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SRGAP3O43295 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SRGAP3O43295 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SRGAP3O43295 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
SRGAP3O43295 CRYGEP-201ENST00000412192 528 ntBASIC21.24■□□□□ 0.99
SRGAP3O43295 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.24■□□□□ 0.99
SRGAP3O43295 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC21.24■□□□□ 0.99
SRGAP3O43295 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.24■□□□□ 0.99
SRGAP3O43295 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SRGAP3O43295 CYB561-216ENST00000582297 897 ntTSL 3 BASIC21.24■□□□□ 0.99
SRGAP3O43295 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.24■□□□□ 0.99
SRGAP3O43295 AC140113.2-201ENST00000604370 208 ntBASIC21.24■□□□□ 0.99
SRGAP3O43295 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SRGAP3O43295 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC21.24■□□□□ 0.99
SRGAP3O43295 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC21.24■□□□□ 0.99
SRGAP3O43295 AC060834.1-201ENST00000443027 2032 ntBASIC21.24■□□□□ 0.99
SRGAP3O43295 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SRGAP3O43295 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC21.24■□□□□ 0.99
SRGAP3O43295 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SRGAP3O43295 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SRGAP3O43295 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC21.24■□□□□ 0.99
SRGAP3O43295 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SRGAP3O43295 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SRGAP3O43295 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SRGAP3O43295 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.23■□□□□ 0.99
SRGAP3O43295 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SRGAP3O43295 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SRGAP3O43295 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SRGAP3O43295 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
SRGAP3O43295 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SRGAP3O43295 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
SRGAP3O43295 DUX4L17-201ENST00000557360 1267 ntBASIC21.23■□□□□ 0.99
SRGAP3O43295 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SRGAP3O43295 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRGAP3O43295 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.23■□□□□ 0.99
SRGAP3O43295 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms