Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.87
FOXN1O15353 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
FOXN1O15353 GNAS-203ENST00000306120 1878 ntBASIC20.45■□□□□ 0.86
FOXN1O15353 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN1O15353 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
FOXN1O15353 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN1O15353 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
FOXN1O15353 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN1O15353 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.45■□□□□ 0.86
FOXN1O15353 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN1O15353 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN1O15353 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN1O15353 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.45■□□□□ 0.86
FOXN1O15353 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.45■□□□□ 0.86
FOXN1O15353 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.45■□□□□ 0.86
FOXN1O15353 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.45■□□□□ 0.86
FOXN1O15353 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.45■□□□□ 0.86
FOXN1O15353 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.45■□□□□ 0.86
FOXN1O15353 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.45■□□□□ 0.86
FOXN1O15353 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.45■□□□□ 0.86
FOXN1O15353 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.45■□□□□ 0.86
FOXN1O15353 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.45■□□□□ 0.86
FOXN1O15353 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN1O15353 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
FOXN1O15353 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN1O15353 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN1O15353 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN1O15353 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN1O15353 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN1O15353 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.45■□□□□ 0.86
FOXN1O15353 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.45■□□□□ 0.86
FOXN1O15353 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
FOXN1O15353 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.45■□□□□ 0.86
FOXN1O15353 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN1O15353 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN1O15353 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
FOXN1O15353 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.44■□□□□ 0.86
FOXN1O15353 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
FOXN1O15353 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN1O15353 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
FOXN1O15353 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN1O15353 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN1O15353 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXN1O15353 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
FOXN1O15353 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
FOXN1O15353 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.44■□□□□ 0.86
FOXN1O15353 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXN1O15353 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
FOXN1O15353 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN1O15353 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN1O15353 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXN1O15353 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXN1O15353 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.44■□□□□ 0.86
FOXN1O15353 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN1O15353 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.44■□□□□ 0.86
FOXN1O15353 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.44■□□□□ 0.86
FOXN1O15353 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.44■□□□□ 0.86
FOXN1O15353 AC140878.1-201ENST00000565277 250 ntBASIC20.44■□□□□ 0.86
FOXN1O15353 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN1O15353 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN1O15353 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXN1O15353 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXN1O15353 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN1O15353 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN1O15353 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
FOXN1O15353 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN1O15353 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN1O15353 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.43■□□□□ 0.86
FOXN1O15353 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.43■□□□□ 0.86
FOXN1O15353 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
FOXN1O15353 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.43■□□□□ 0.86
FOXN1O15353 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.43■□□□□ 0.86
FOXN1O15353 AC006116.8-202ENST00000587620 1550 ntBASIC20.43■□□□□ 0.86
FOXN1O15353 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN1O15353 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.43■□□□□ 0.86
FOXN1O15353 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN1O15353 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN1O15353 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN1O15353 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.43■□□□□ 0.86
FOXN1O15353 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN1O15353 AC092919.2-201ENST00000623631 1645 ntBASIC20.43■□□□□ 0.86
FOXN1O15353 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.43■□□□□ 0.86
FOXN1O15353 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN1O15353 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.43■□□□□ 0.86
FOXN1O15353 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
FOXN1O15353 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.43■□□□□ 0.86
FOXN1O15353 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC20.43■□□□□ 0.86
FOXN1O15353 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN1O15353 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.43■□□□□ 0.86
FOXN1O15353 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.43■□□□□ 0.86
FOXN1O15353 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.43■□□□□ 0.86
FOXN1O15353 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.43■□□□□ 0.86
FOXN1O15353 AP001059.3-201ENST00000619053 235 ntBASIC20.43■□□□□ 0.86
FOXN1O15353 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN1O15353 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN1O15353 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN1O15353 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN1O15353 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN1O15353 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.43■□□□□ 0.86
FOXN1O15353 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms