Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MID1O15344 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MID1O15344 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MID1O15344 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
MID1O15344 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
MID1O15344 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MID1O15344 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MID1O15344 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MID1O15344 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MID1O15344 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MID1O15344 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.14■□□□□ 0.33
MID1O15344 ACTG1P14-201ENST00000446382 1122 ntBASIC17.14■□□□□ 0.33
MID1O15344 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
MID1O15344 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MID1O15344 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.14■□□□□ 0.33
MID1O15344 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.14■□□□□ 0.33
MID1O15344 AC027796.2-201ENST00000575326 344 ntBASIC17.14■□□□□ 0.33
MID1O15344 AP002472.1-201ENST00000577490 586 ntBASIC17.14■□□□□ 0.33
MID1O15344 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.14■□□□□ 0.33
MID1O15344 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
MID1O15344 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.14■□□□□ 0.33
MID1O15344 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
MID1O15344 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.14■□□□□ 0.33
MID1O15344 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
MID1O15344 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MID1O15344 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
MID1O15344 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
MID1O15344 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MID1O15344 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.14■□□□□ 0.33
MID1O15344 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MID1O15344 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MID1O15344 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MID1O15344 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MID1O15344 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MID1O15344 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.13■□□□□ 0.33
MID1O15344 AC134043.2-201ENST00000624206 2238 ntBASIC17.13■□□□□ 0.33
MID1O15344 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.13■□□□□ 0.33
MID1O15344 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MID1O15344 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MID1O15344 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.13■□□□□ 0.33
MID1O15344 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.13■□□□□ 0.33
MID1O15344 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MID1O15344 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.13■□□□□ 0.33
MID1O15344 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
MID1O15344 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MID1O15344 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MID1O15344 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.13■□□□□ 0.33
MID1O15344 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MID1O15344 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.13■□□□□ 0.33
MID1O15344 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.13■□□□□ 0.33
MID1O15344 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.13■□□□□ 0.33
MID1O15344 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.13■□□□□ 0.33
MID1O15344 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
MID1O15344 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.13■□□□□ 0.33
MID1O15344 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MID1O15344 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MID1O15344 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MID1O15344 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MID1O15344 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MID1O15344 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MID1O15344 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.13■□□□□ 0.33
MID1O15344 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MID1O15344 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MID1O15344 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MID1O15344 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MID1O15344 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MID1O15344 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MID1O15344 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MID1O15344 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.12■□□□□ 0.33
MID1O15344 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.12■□□□□ 0.33
MID1O15344 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
MID1O15344 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MID1O15344 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MID1O15344 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MID1O15344 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.12■□□□□ 0.33
MID1O15344 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.12■□□□□ 0.33
MID1O15344 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.12■□□□□ 0.33
MID1O15344 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.12■□□□□ 0.33
MID1O15344 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.12■□□□□ 0.33
MID1O15344 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MID1O15344 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
MID1O15344 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MID1O15344 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MID1O15344 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.12■□□□□ 0.33
MID1O15344 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MID1O15344 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MID1O15344 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MID1O15344 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MID1O15344 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.12■□□□□ 0.33
MID1O15344 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MID1O15344 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.11■□□□□ 0.33
MID1O15344 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.11■□□□□ 0.33
MID1O15344 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MID1O15344 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.11■□□□□ 0.33
MID1O15344 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
MID1O15344 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
MID1O15344 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MID1O15344 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
MID1O15344 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MID1O15344 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms