Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC28.94■■■□□ 2.22
CUX2O14529 AC026740.1-201ENST00000607068 791 ntBASIC28.94■■■□□ 2.22
CUX2O14529 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
CUX2O14529 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CUX2O14529 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CUX2O14529 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC28.93■■■□□ 2.22
CUX2O14529 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC28.93■■■□□ 2.22
CUX2O14529 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC28.93■■■□□ 2.22
CUX2O14529 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
CUX2O14529 SLC25A24P2-201ENST00000415059 510 ntBASIC28.93■■■□□ 2.22
CUX2O14529 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC28.93■■■□□ 2.22
CUX2O14529 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
CUX2O14529 C2orf69P2-201ENST00000562032 1123 ntBASIC28.93■■■□□ 2.22
CUX2O14529 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC28.93■■■□□ 2.22
CUX2O14529 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC28.93■■■□□ 2.22
CUX2O14529 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC28.93■■■□□ 2.22
CUX2O14529 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
CUX2O14529 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
CUX2O14529 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CUX2O14529 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC28.93■■■□□ 2.22
CUX2O14529 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
CUX2O14529 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC28.92■■■□□ 2.22
CUX2O14529 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CUX2O14529 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC28.92■■■□□ 2.22
CUX2O14529 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC28.92■■■□□ 2.22
CUX2O14529 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC28.92■■■□□ 2.22
CUX2O14529 MYCLP2-201ENST00000449268 967 ntBASIC28.92■■■□□ 2.22
CUX2O14529 PFN1P12-201ENST00000455938 534 ntBASIC28.92■■■□□ 2.22
CUX2O14529 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC28.92■■■□□ 2.22
CUX2O14529 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CUX2O14529 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC28.92■■■□□ 2.22
CUX2O14529 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC28.92■■■□□ 2.22
CUX2O14529 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC28.92■■■□□ 2.22
CUX2O14529 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
CUX2O14529 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC28.92■■■□□ 2.22
CUX2O14529 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CUX2O14529 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC28.91■■■□□ 2.22
CUX2O14529 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
CUX2O14529 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC28.91■■■□□ 2.22
CUX2O14529 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC28.91■■■□□ 2.22
CUX2O14529 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC28.91■■■□□ 2.22
CUX2O14529 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC28.91■■■□□ 2.22
CUX2O14529 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC28.91■■■□□ 2.22
CUX2O14529 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC28.91■■■□□ 2.22
CUX2O14529 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC28.91■■■□□ 2.22
CUX2O14529 U62317.3-201ENST00000608319 855 ntBASIC28.91■■■□□ 2.22
CUX2O14529 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC28.91■■■□□ 2.22
CUX2O14529 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC28.91■■■□□ 2.22
CUX2O14529 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC28.91■■■□□ 2.22
CUX2O14529 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
CUX2O14529 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
CUX2O14529 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CUX2O14529 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CUX2O14529 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC28.91■■■□□ 2.22
CUX2O14529 PDIA3P1-201ENST00000471856 1510 ntBASIC28.91■■■□□ 2.22
CUX2O14529 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CUX2O14529 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CUX2O14529 CTBP2P5-201ENST00000454986 1264 ntBASIC28.91■■■□□ 2.22
CUX2O14529 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC28.91■■■□□ 2.22
CUX2O14529 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CUX2O14529 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
CUX2O14529 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC28.9■■■□□ 2.22
CUX2O14529 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
CUX2O14529 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
CUX2O14529 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC28.9■■■□□ 2.22
CUX2O14529 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CUX2O14529 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
CUX2O14529 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CUX2O14529 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC28.9■■■□□ 2.22
CUX2O14529 RPS19-201ENST00000221975 500 ntTSL 3 BASIC28.9■■■□□ 2.22
CUX2O14529 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
CUX2O14529 AC005229.1-201ENST00000392885 409 ntBASIC28.9■■■□□ 2.22
CUX2O14529 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC28.9■■■□□ 2.22
CUX2O14529 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC28.9■■■□□ 2.22
CUX2O14529 AC105233.2-201ENST00000523697 349 ntBASIC28.9■■■□□ 2.22
CUX2O14529 AF228730.5-201ENST00000530288 346 ntBASIC28.9■■■□□ 2.22
CUX2O14529 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC28.9■■■□□ 2.22
CUX2O14529 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC28.9■■■□□ 2.22
CUX2O14529 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC28.9■■■□□ 2.22
CUX2O14529 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CUX2O14529 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CUX2O14529 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CUX2O14529 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
CUX2O14529 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CUX2O14529 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC28.89■■■□□ 2.22
CUX2O14529 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CUX2O14529 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC28.89■■■□□ 2.22
CUX2O14529 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC28.89■■■□□ 2.22
CUX2O14529 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
CUX2O14529 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC28.89■■■□□ 2.22
CUX2O14529 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC28.89■■■□□ 2.21
CUX2O14529 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC28.89■■■□□ 2.21
CUX2O14529 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.21
CUX2O14529 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC28.89■■■□□ 2.21
CUX2O14529 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CUX2O14529 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC28.88■■■□□ 2.21
CUX2O14529 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
CUX2O14529 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
CUX2O14529 WFDC1-204ENST00000613603 549 ntBASIC28.88■■■□□ 2.21
CUX2O14529 RPSAP52-203ENST00000622976 1023 ntBASIC28.88■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms