Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SOX1O00570 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOX1O00570 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOX1O00570 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SOX1O00570 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.07■□□□□ 0.48
SOX1O00570 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SOX1O00570 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SOX1O00570 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
SOX1O00570 AC009949.1-201ENST00000623048 1830 ntBASIC18.07■□□□□ 0.48
SOX1O00570 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SOX1O00570 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SOX1O00570 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.06■□□□□ 0.48
SOX1O00570 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SOX1O00570 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SOX1O00570 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.06■□□□□ 0.48
SOX1O00570 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SOX1O00570 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SOX1O00570 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SOX1O00570 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.06■□□□□ 0.48
SOX1O00570 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.06■□□□□ 0.48
SOX1O00570 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SOX1O00570 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SOX1O00570 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SOX1O00570 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.06■□□□□ 0.48
SOX1O00570 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.06■□□□□ 0.48
SOX1O00570 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.06■□□□□ 0.48
SOX1O00570 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.06■□□□□ 0.48
SOX1O00570 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.06■□□□□ 0.48
SOX1O00570 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
SOX1O00570 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.06■□□□□ 0.48
SOX1O00570 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.06■□□□□ 0.48
SOX1O00570 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SOX1O00570 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SOX1O00570 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SOX1O00570 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SOX1O00570 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.06■□□□□ 0.48
SOX1O00570 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.06■□□□□ 0.48
SOX1O00570 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SOX1O00570 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.06■□□□□ 0.48
SOX1O00570 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SOX1O00570 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SOX1O00570 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
SOX1O00570 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SOX1O00570 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SOX1O00570 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SOX1O00570 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SOX1O00570 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SOX1O00570 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.05■□□□□ 0.48
SOX1O00570 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SOX1O00570 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
SOX1O00570 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SOX1O00570 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.05■□□□□ 0.48
SOX1O00570 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SOX1O00570 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SOX1O00570 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
SOX1O00570 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SOX1O00570 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SOX1O00570 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SOX1O00570 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SOX1O00570 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.05■□□□□ 0.48
SOX1O00570 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.05■□□□□ 0.48
SOX1O00570 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.05■□□□□ 0.48
SOX1O00570 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.05■□□□□ 0.48
SOX1O00570 AC123567.1-201ENST00000548294 1261 ntBASIC18.05■□□□□ 0.48
SOX1O00570 RN7SL828P-201ENST00000607615 303 ntBASIC18.05■□□□□ 0.48
SOX1O00570 WFDC1-204ENST00000613603 549 ntBASIC18.05■□□□□ 0.48
SOX1O00570 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.05■□□□□ 0.48
SOX1O00570 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.05■□□□□ 0.48
SOX1O00570 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SOX1O00570 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SOX1O00570 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SOX1O00570 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
SOX1O00570 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SOX1O00570 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SOX1O00570 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
SOX1O00570 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SOX1O00570 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.04■□□□□ 0.48
SOX1O00570 PDIA3P1-201ENST00000471856 1510 ntBASIC18.04■□□□□ 0.48
SOX1O00570 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SOX1O00570 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.04■□□□□ 0.48
SOX1O00570 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.04■□□□□ 0.48
SOX1O00570 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SOX1O00570 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SOX1O00570 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SOX1O00570 AL080243.2-201ENST00000418783 582 ntBASIC18.04■□□□□ 0.48
SOX1O00570 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.04■□□□□ 0.48
SOX1O00570 AC007551.1-201ENST00000457394 519 ntBASIC18.04■□□□□ 0.48
SOX1O00570 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.04■□□□□ 0.48
SOX1O00570 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.04■□□□□ 0.48
SOX1O00570 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.04■□□□□ 0.48
SOX1O00570 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.04■□□□□ 0.48
SOX1O00570 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.04■□□□□ 0.48
SOX1O00570 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.04■□□□□ 0.48
SOX1O00570 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.04■□□□□ 0.48
SOX1O00570 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SOX1O00570 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SOX1O00570 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SOX1O00570 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.04■□□□□ 0.48
SOX1O00570 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
SOX1O00570 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms