Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 AC003669.1-201ENST00000334569 611 ntBASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 FUOM-202ENST00000368551 628 ntTSL 3 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 ATP5G2P1-201ENST00000433580 426 ntBASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 MIR3180-1-201ENST00000580374 94 ntBASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 MIR3180-3-201ENST00000584616 94 ntBASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 STK25P1-201ENST00000585406 838 ntBASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 AC138894.3-201ENST00000603787 634 ntBASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 NPAP1P7-201ENST00000613027 823 ntBASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 AC114341.1-201ENST00000618070 349 ntBASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 AC073592.5-201ENST00000624854 528 ntBASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV1A0A0A0MS02 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 RCN1P2-201ENST00000398357 915 ntBASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 POM121L3P-201ENST00000419331 1163 ntBASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 IGHV3-47-201ENST00000425060 335 ntBASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.49□□□□□ -0.41
TRGV1A0A0A0MS02 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms