Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 AC007613.1-201ENST00000572811 2597 ntBASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 HMGA1P7-201ENST00000406908 502 ntBASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 SPCS2P4-201ENST00000436160 681 ntBASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 AC125807.1-201ENST00000483097 614 ntBASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 KRT8P23-201ENST00000560090 1207 ntBASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 HTR7P1-202ENST00000624664 4411 ntBASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC187A0A096LP49 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 AC138028.4-201ENST00000564984 1845 ntBASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 SPDYE7P-202ENST00000420373 878 ntBASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 GPS2P2-201ENST00000430745 888 ntBASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 AL009183.1-201ENST00000603760 355 ntBASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms