Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 AP002472.1-201ENST00000577490 586 ntBASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 AC068137.2-201ENST00000605408 478 ntBASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 AC091812.2-201ENST00000619081 385 ntBASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.79■□□□□ 0.28
CSNK1G3Q9Y6M4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.78■□□□□ 0.28
CSNK1G3Q9Y6M4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms