Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 AP000867.4-201ENST00000641616 219 ntBASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA3Q9Y5H8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 AC148477.5-201ENST00000625164 1645 ntBASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 NSUN5P1-202ENST00000421140 1535 ntBASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 NSUN5P2-203ENST00000457352 1529 ntBASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 AL645728.1-201ENST00000366221 2101 ntBASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 ACTG1P4-201ENST00000425123 1122 ntBASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA3Q9Y5H8 AC046158.3-201ENST00000624947 2558 ntBASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 NUS1P1-201ENST00000446295 882 ntBASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 SIGLEC30P-201ENST00000455569 941 ntBASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 TOB2P1-201ENST00000469761 992 ntBASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms