Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 RPS15P9-201ENST00000494093 319 ntBASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 IGHV3-22-201ENST00000520721 359 ntBASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 AC092053.1-201ENST00000605787 1936 ntBASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 AC005593.1-201ENST00000624894 515 ntBASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGC4Q9Y5F7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGC4Q9Y5F7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGC4Q9Y5F7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGC4Q9Y5F7 LINC02012-201ENST00000608206 1725 ntBASIC17.33■□□□□ 0.37
PCDHGC4Q9Y5F7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGC4Q9Y5F7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.33■□□□□ 0.37
PCDHGC4Q9Y5F7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGC4Q9Y5F7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGC4Q9Y5F7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGC4Q9Y5F7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGC4Q9Y5F7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHGC4Q9Y5F7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGC4Q9Y5F7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGC4Q9Y5F7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGC4Q9Y5F7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
PCDHGC4Q9Y5F7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGC4Q9Y5F7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.33■□□□□ 0.36
PCDHGC4Q9Y5F7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGC4Q9Y5F7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PCDHGC4Q9Y5F7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGC4Q9Y5F7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGC4Q9Y5F7 AP001094.4-201ENST00000579008 2176 ntBASIC17.33■□□□□ 0.36
PCDHGC4Q9Y5F7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PCDHGC4Q9Y5F7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGC4Q9Y5F7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
PCDHGC4Q9Y5F7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHGC4Q9Y5F7 PI4KAP1-204ENST00000612579 1703 ntBASIC17.33■□□□□ 0.36
PCDHGC4Q9Y5F7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 AC120114.3-201ENST00000611923 658 ntBASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 PGM5P2-202ENST00000637225 1043 ntBASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 AL805961.1-202ENST00000641562 540 ntBASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC4Q9Y5F7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC4Q9Y5F7 AP002414.1-201ENST00000391405 1147 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms