Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 RPSAP43-201ENST00000402237 625 ntBASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 AC012640.2-201ENST00000561606 901 ntBASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 AL139424.1-201ENST00000607572 797 ntBASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 AC055717.3-201ENST00000622967 595 ntBASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 SIGLEC16-201ENST00000599858 1437 ntBASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHB11Q9Y5F2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 AC009053.2-201ENST00000563701 2365 ntBASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 AC046185.3-201ENST00000623228 1824 ntBASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 YBX2P1-201ENST00000394192 760 ntBASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 SIGLEC30P-201ENST00000455569 941 ntBASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 AC002347.1-201ENST00000569543 541 ntBASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 AC006557.2-201ENST00000592985 1240 ntBASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 AL589935.2-201ENST00000616471 1231 ntBASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 AC073592.4-201ENST00000623827 446 ntBASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 PGM5P2-202ENST00000637225 1043 ntBASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 AC012313.1-201ENST00000593393 3059 ntBASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB11Q9Y5F2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 CROCCP2-202ENST00000412962 2773 ntBASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 AP001094.4-201ENST00000579008 2176 ntBASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 UNC93B6-202ENST00000528242 690 ntBASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 AC005593.1-201ENST00000624894 515 ntBASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms