Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.27■□□□□ 0.36
PKP3Q9Y446 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PKP3Q9Y446 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.27■□□□□ 0.36
PKP3Q9Y446 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PKP3Q9Y446 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PKP3Q9Y446 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PKP3Q9Y446 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.27■□□□□ 0.35
PKP3Q9Y446 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
PKP3Q9Y446 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PKP3Q9Y446 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PKP3Q9Y446 EGFEM1P-202ENST00000431685 1563 ntBASIC17.27■□□□□ 0.35
PKP3Q9Y446 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.27■□□□□ 0.35
PKP3Q9Y446 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.27■□□□□ 0.35
PKP3Q9Y446 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.27■□□□□ 0.35
PKP3Q9Y446 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PKP3Q9Y446 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PKP3Q9Y446 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP3Q9Y446 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP3Q9Y446 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PKP3Q9Y446 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PKP3Q9Y446 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP3Q9Y446 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP3Q9Y446 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PKP3Q9Y446 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PKP3Q9Y446 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP3Q9Y446 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
PKP3Q9Y446 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP3Q9Y446 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.26■□□□□ 0.35
PKP3Q9Y446 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP3Q9Y446 TPM4P1-201ENST00000436100 807 ntBASIC17.26■□□□□ 0.35
PKP3Q9Y446 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP3Q9Y446 AC021087.4-201ENST00000563761 564 ntBASIC17.26■□□□□ 0.35
PKP3Q9Y446 AC139887.3-201ENST00000568585 713 ntBASIC17.26■□□□□ 0.35
PKP3Q9Y446 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.26■□□□□ 0.35
PKP3Q9Y446 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.26■□□□□ 0.35
PKP3Q9Y446 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PKP3Q9Y446 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.26■□□□□ 0.35
PKP3Q9Y446 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.26■□□□□ 0.35
PKP3Q9Y446 PRORSD1P-202ENST00000563365 2154 ntBASIC17.26■□□□□ 0.35
PKP3Q9Y446 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PKP3Q9Y446 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP3Q9Y446 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP3Q9Y446 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PKP3Q9Y446 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
PKP3Q9Y446 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP3Q9Y446 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PKP3Q9Y446 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PKP3Q9Y446 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 LINC02012-201ENST00000608206 1725 ntBASIC17.25■□□□□ 0.35
PKP3Q9Y446 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 AF186996.4-201ENST00000467186 377 ntBASIC17.25■□□□□ 0.35
PKP3Q9Y446 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 AC064862.7-201ENST00000604520 867 ntBASIC17.25■□□□□ 0.35
PKP3Q9Y446 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PKP3Q9Y446 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.25■□□□□ 0.35
PKP3Q9Y446 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.25■□□□□ 0.35
PKP3Q9Y446 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PKP3Q9Y446 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP3Q9Y446 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.24■□□□□ 0.35
PKP3Q9Y446 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.24■□□□□ 0.35
PKP3Q9Y446 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP3Q9Y446 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP3Q9Y446 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms