Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
NINLQ9Y2I6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
NINLQ9Y2I6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 AC012569.1-201ENST00000591191 1524 ntBASIC23.32■■□□□ 1.32
NINLQ9Y2I6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NINLQ9Y2I6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 MTRF1LP2-201ENST00000506027 1122 ntBASIC23.31■■□□□ 1.32
NINLQ9Y2I6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 AL009183.1-201ENST00000603760 355 ntBASIC23.31■■□□□ 1.32
NINLQ9Y2I6 AL035252.4-201ENST00000624174 288 ntBASIC23.31■■□□□ 1.32
NINLQ9Y2I6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 KRT8P49-201ENST00000604166 1432 ntBASIC23.31■■□□□ 1.32
NINLQ9Y2I6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
NINLQ9Y2I6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NINLQ9Y2I6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NINLQ9Y2I6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC23.3■■□□□ 1.32
NINLQ9Y2I6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC23.3■■□□□ 1.32
NINLQ9Y2I6 FAM86C2P-203ENST00000528684 1004 ntBASIC23.3■■□□□ 1.32
NINLQ9Y2I6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
NINLQ9Y2I6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC23.3■■□□□ 1.32
NINLQ9Y2I6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC23.3■■□□□ 1.32
NINLQ9Y2I6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NINLQ9Y2I6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NINLQ9Y2I6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NINLQ9Y2I6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC23.3■■□□□ 1.32
NINLQ9Y2I6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
NINLQ9Y2I6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NINLQ9Y2I6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC23.3■■□□□ 1.32
NINLQ9Y2I6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
NINLQ9Y2I6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC23.3■■□□□ 1.32
NINLQ9Y2I6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC23.3■■□□□ 1.32
NINLQ9Y2I6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NINLQ9Y2I6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NINLQ9Y2I6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NINLQ9Y2I6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NINLQ9Y2I6 LINC02012-201ENST00000608206 1725 ntBASIC23.3■■□□□ 1.32
NINLQ9Y2I6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 AC092474.2-201ENST00000424288 719 ntBASIC23.29■■□□□ 1.32
NINLQ9Y2I6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 RBM7-207ENST00000544582 692 ntTSL 3 BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 AC004835.2-201ENST00000603762 682 ntBASIC23.29■■□□□ 1.32
NINLQ9Y2I6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
NINLQ9Y2I6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms