Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 AL591846.1-201ENST00000451736 433 ntBASIC6.91□□□□□ -1.3
MACF1Q9UPN3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 JPT2-203ENST00000382711 894 ntTSL 4 BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 KRT90P-201ENST00000549264 1064 ntBASIC6.91□□□□□ -1.3
MACF1Q9UPN3 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 AL118516.1-201ENST00000564152 670 ntBASIC6.91□□□□□ -1.3
MACF1Q9UPN3 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 WDR7-208ENST00000589935 544 ntTSL 4 BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
MACF1Q9UPN3 CYP46A4P-201ENST00000414953 267 ntBASIC6.9□□□□□ -1.3
MACF1Q9UPN3 AP000346.4-201ENST00000614827 381 ntBASIC6.9□□□□□ -1.3
MACF1Q9UPN3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 AC104982.3-201ENST00000581995 514 ntBASIC6.9□□□□□ -1.3
MACF1Q9UPN3 MIR4515-201ENST00000584082 81 ntBASIC6.9□□□□□ -1.3
MACF1Q9UPN3 AL139011.1-202ENST00000642063 584 ntBASIC6.9□□□□□ -1.3
MACF1Q9UPN3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 UROS-201ENST00000368774 744 ntTSL 2 BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 SERBP1P2-201ENST00000436888 1164 ntBASIC6.9□□□□□ -1.3
MACF1Q9UPN3 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 AC233723.2-201ENST00000623798 2106 ntBASIC6.9□□□□□ -1.3
MACF1Q9UPN3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 CEP164P1-201ENST00000455142 418 ntBASIC6.9□□□□□ -1.3
MACF1Q9UPN3 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 AC138466.4-201ENST00000623965 852 ntBASIC6.9□□□□□ -1.3
MACF1Q9UPN3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
MACF1Q9UPN3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC6.9□□□□□ -1.31
MACF1Q9UPN3 Z97180.1-201ENST00000445173 988 ntBASIC6.9□□□□□ -1.31
MACF1Q9UPN3 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC6.9□□□□□ -1.31
MACF1Q9UPN3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
MACF1Q9UPN3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
MACF1Q9UPN3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC6.9□□□□□ -1.31
MACF1Q9UPN3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
MACF1Q9UPN3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
MACF1Q9UPN3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC6.9□□□□□ -1.31
MACF1Q9UPN3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC6.9□□□□□ -1.31
MACF1Q9UPN3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC6.9□□□□□ -1.31
MACF1Q9UPN3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
MACF1Q9UPN3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
MACF1Q9UPN3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
MACF1Q9UPN3 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC6.9□□□□□ -1.31
MACF1Q9UPN3 BANF1P1-201ENST00000553684 263 ntBASIC6.9□□□□□ -1.31
MACF1Q9UPN3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC6.9□□□□□ -1.31
MACF1Q9UPN3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.31
MACF1Q9UPN3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC6.9□□□□□ -1.31
MACF1Q9UPN3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
MACF1Q9UPN3 ZBTB12BP-201ENST00000314232 1122 ntBASIC6.89□□□□□ -1.31
MACF1Q9UPN3 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
MACF1Q9UPN3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms