Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 AC023141.13-201ENST00000604991 943 ntBASIC17.51■□□□□ 0.39
EBF1Q9UH73 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
EBF1Q9UH73 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
EBF1Q9UH73 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
EBF1Q9UH73 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EBF1Q9UH73 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EBF1Q9UH73 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
EBF1Q9UH73 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.51■□□□□ 0.39
EBF1Q9UH73 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EBF1Q9UH73 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.51■□□□□ 0.39
EBF1Q9UH73 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
EBF1Q9UH73 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
EBF1Q9UH73 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.5■□□□□ 0.39
EBF1Q9UH73 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.5■□□□□ 0.39
EBF1Q9UH73 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 TSEN15P1-201ENST00000423257 515 ntBASIC17.5■□□□□ 0.39
EBF1Q9UH73 FAM58CP-201ENST00000435741 640 ntBASIC17.5■□□□□ 0.39
EBF1Q9UH73 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 DDX43P3-201ENST00000441064 443 ntBASIC17.5■□□□□ 0.39
EBF1Q9UH73 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.5■□□□□ 0.39
EBF1Q9UH73 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.5■□□□□ 0.39
EBF1Q9UH73 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.5■□□□□ 0.39
EBF1Q9UH73 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.5■□□□□ 0.39
EBF1Q9UH73 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.5■□□□□ 0.39
EBF1Q9UH73 AC106028.4-201ENST00000614509 607 ntBASIC17.5■□□□□ 0.39
EBF1Q9UH73 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
EBF1Q9UH73 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.5■□□□□ 0.39
EBF1Q9UH73 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
EBF1Q9UH73 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
EBF1Q9UH73 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.5■□□□□ 0.39
EBF1Q9UH73 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.5■□□□□ 0.39
EBF1Q9UH73 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
EBF1Q9UH73 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
EBF1Q9UH73 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
EBF1Q9UH73 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.5■□□□□ 0.39
EBF1Q9UH73 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
EBF1Q9UH73 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
EBF1Q9UH73 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EBF1Q9UH73 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 AC009336.1-201ENST00000608941 1553 ntBASIC17.49■□□□□ 0.39
EBF1Q9UH73 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 AC025580.3-201ENST00000617932 1424 ntBASIC17.49■□□□□ 0.39
EBF1Q9UH73 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.49■□□□□ 0.39
EBF1Q9UH73 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.49■□□□□ 0.39
EBF1Q9UH73 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.49■□□□□ 0.39
EBF1Q9UH73 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.49■□□□□ 0.39
EBF1Q9UH73 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
EBF1Q9UH73 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.49■□□□□ 0.39
EBF1Q9UH73 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.49■□□□□ 0.39
EBF1Q9UH73 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.49■□□□□ 0.39
EBF1Q9UH73 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.49■□□□□ 0.39
EBF1Q9UH73 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EBF1Q9UH73 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
EBF1Q9UH73 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.48■□□□□ 0.39
EBF1Q9UH73 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EBF1Q9UH73 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms