Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
LRIT1Q9P2V4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 AC133963.1-201ENST00000504166 1679 ntBASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 AC092902.6-201ENST00000641783 218 ntBASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRIT1Q9P2V4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 HMGN1P19-201ENST00000436976 333 ntBASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 AP002472.1-201ENST00000577490 586 ntBASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 AC092919.2-201ENST00000623631 1645 ntBASIC16.56■□□□□ 0.24
LRIT1Q9P2V4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 AC005332.8-201ENST00000622750 2735 ntBASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 AP000344.2-201ENST00000512987 629 ntBASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 AC112191.1-201ENST00000523689 701 ntBASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 AC134043.2-201ENST00000624206 2238 ntBASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT1Q9P2V4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms