Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 AC243591.1-201ENST00000452967 1364 ntBASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 SLC25A1P1-201ENST00000528351 927 ntBASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 TERC-201ENST00000602385 541 ntBASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 MIR7706-201ENST00000613747 67 ntBASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 AC097374.2-201ENST00000618617 1306 ntBASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NCKIPSDQ9NZQ3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKIPSDQ9NZQ3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKIPSDQ9NZQ3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms