Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRMT13Q9NUP7 GNAS-203ENST00000306120 1878 ntBASIC18.73■□□□□ 0.59
TRMT13Q9NUP7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRMT13Q9NUP7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.73■□□□□ 0.59
TRMT13Q9NUP7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRMT13Q9NUP7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 AC012317.2-201ENST00000623305 2251 ntBASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.72■□□□□ 0.59
TRMT13Q9NUP7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 AC109635.5-201ENST00000533593 962 ntBASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 AC012645.4-201ENST00000610691 1061 ntBASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 AC084121.4-201ENST00000641598 221 ntBASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 AF228730.8-201ENST00000642140 221 ntBASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRMT13Q9NUP7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
TRMT13Q9NUP7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TRMT13Q9NUP7 ABALON-201ENST00000629058 1903 ntBASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 SPDYE7P-202ENST00000420373 878 ntBASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 LINC02560-201ENST00000596379 459 ntBASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 MIR6080-201ENST00000617359 66 ntBASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 AC020763.4-201ENST00000623414 4170 ntBASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.7■□□□□ 0.58
TRMT13Q9NUP7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRMT13Q9NUP7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms