Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 PVRIG2P-201ENST00000435460 978 ntBASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCM2LQ9NUG4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
CCM2LQ9NUG4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CCM2LQ9NUG4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 AC004870.1-201ENST00000315132 882 ntBASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 AC124947.2-201ENST00000547118 1133 ntBASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 GPALPP1-207ENST00000611650 899 ntBASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CCM2LQ9NUG4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 STARP1-201ENST00000397973 869 ntBASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 HYMAI.1-201ENST00000620949 238 ntBASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCM2LQ9NUG4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms