Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 MYLKP1-201ENST00000509077 1580 ntBASIC20.38■□□□□ 0.85
RTN4Q9NQC3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTN4Q9NQC3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 KSR1P1-201ENST00000446298 240 ntBASIC20.37■□□□□ 0.85
RTN4Q9NQC3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 CKBP1-201ENST00000565489 1086 ntBASIC20.37■□□□□ 0.85
RTN4Q9NQC3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
RTN4Q9NQC3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 CYP2T1P-202ENST00000641596 2535 ntBASIC20.36■□□□□ 0.85
RTN4Q9NQC3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 FLJ16779-201ENST00000612722 7638 ntBASIC20.36■□□□□ 0.85
RTN4Q9NQC3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 AC005915.1-201ENST00000624912 2018 ntBASIC20.36■□□□□ 0.85
RTN4Q9NQC3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 KRT18P41-201ENST00000518924 1277 ntBASIC20.36■□□□□ 0.85
RTN4Q9NQC3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RTN4Q9NQC3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 SNTG1-202ENST00000518864 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 AL359183.1-201ENST00000623796 2132 ntBASIC20.35■□□□□ 0.85
RTN4Q9NQC3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 ESRRAP1-201ENST00000400596 1257 ntBASIC20.35■□□□□ 0.85
RTN4Q9NQC3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 AP002982.1-201ENST00000492365 877 ntBASIC20.35■□□□□ 0.85
RTN4Q9NQC3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC20.35■□□□□ 0.85
RTN4Q9NQC3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.34■□□□□ 0.85
RTN4Q9NQC3 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTN4Q9NQC3 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTN4Q9NQC3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
RTN4Q9NQC3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms