Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 UNC93B2-201ENST00000285383 730 ntBASIC15.68■□□□□ 0.1
HMG20AQ9NP66 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 TMEM191A-211ENST00000637163 1067 ntBASIC15.68■□□□□ 0.1
HMG20AQ9NP66 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 AC034236.2-201ENST00000606662 1610 ntBASIC15.68■□□□□ 0.1
HMG20AQ9NP66 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMG20AQ9NP66 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 RNF216P1-203ENST00000404404 2427 ntBASIC15.67■□□□□ 0.1
HMG20AQ9NP66 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 MIR3180-5-201ENST00000583743 153 ntBASIC15.67■□□□□ 0.1
HMG20AQ9NP66 MIR4785-201ENST00000585005 73 ntBASIC15.67■□□□□ 0.1
HMG20AQ9NP66 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMG20AQ9NP66 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 RBM17P1-201ENST00000453646 1190 ntBASIC15.66■□□□□ 0.1
HMG20AQ9NP66 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms