Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GCM1Q9NP62 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GCM1Q9NP62 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GCM1Q9NP62 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GCM1Q9NP62 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GCM1Q9NP62 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 KRT18P67-201ENST00000432816 1264 ntBASIC14.72□□□□□ -0.05
GCM1Q9NP62 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GCM1Q9NP62 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
GCM1Q9NP62 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
GCM1Q9NP62 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GCM1Q9NP62 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
GCM1Q9NP62 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GCM1Q9NP62 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GCM1Q9NP62 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GCM1Q9NP62 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GCM1Q9NP62 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
GCM1Q9NP62 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
GCM1Q9NP62 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GCM1Q9NP62 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
GCM1Q9NP62 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
GCM1Q9NP62 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GCM1Q9NP62 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GCM1Q9NP62 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
GCM1Q9NP62 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GCM1Q9NP62 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.71□□□□□ -0.05
GCM1Q9NP62 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.71□□□□□ -0.05
GCM1Q9NP62 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.71□□□□□ -0.05
GCM1Q9NP62 AC009078.2-202ENST00000463353 338 ntBASIC14.71□□□□□ -0.05
GCM1Q9NP62 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
GCM1Q9NP62 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GCM1Q9NP62 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.71□□□□□ -0.05
GCM1Q9NP62 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.71□□□□□ -0.05
GCM1Q9NP62 AL662844.1-201ENST00000546340 181 ntBASIC14.71□□□□□ -0.05
GCM1Q9NP62 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.71□□□□□ -0.05
GCM1Q9NP62 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.71□□□□□ -0.05
GCM1Q9NP62 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.71□□□□□ -0.05
GCM1Q9NP62 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.71□□□□□ -0.05
GCM1Q9NP62 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GCM1Q9NP62 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
GCM1Q9NP62 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
GCM1Q9NP62 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
GCM1Q9NP62 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
GCM1Q9NP62 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GCM1Q9NP62 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.71□□□□□ -0.05
GCM1Q9NP62 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GCM1Q9NP62 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GCM1Q9NP62 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.71□□□□□ -0.05
GCM1Q9NP62 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GCM1Q9NP62 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GCM1Q9NP62 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GCM1Q9NP62 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GCM1Q9NP62 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
GCM1Q9NP62 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.71□□□□□ -0.06
GCM1Q9NP62 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.71□□□□□ -0.06
GCM1Q9NP62 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
GCM1Q9NP62 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.71□□□□□ -0.06
GCM1Q9NP62 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
GCM1Q9NP62 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
GCM1Q9NP62 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
GCM1Q9NP62 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GCM1Q9NP62 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GCM1Q9NP62 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.7□□□□□ -0.06
GCM1Q9NP62 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GCM1Q9NP62 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GCM1Q9NP62 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
GCM1Q9NP62 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
GCM1Q9NP62 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
GCM1Q9NP62 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.7□□□□□ -0.06
GCM1Q9NP62 AL138688.1-201ENST00000624851 1594 ntBASIC14.7□□□□□ -0.06
GCM1Q9NP62 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GCM1Q9NP62 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GCM1Q9NP62 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
GCM1Q9NP62 MRPL3P1-201ENST00000400109 1033 ntBASIC14.7□□□□□ -0.06
GCM1Q9NP62 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GCM1Q9NP62 AC018712.1-201ENST00000455767 687 ntBASIC14.7□□□□□ -0.06
GCM1Q9NP62 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
GCM1Q9NP62 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.7□□□□□ -0.06
GCM1Q9NP62 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms