Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPF2Q9HAU5 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC21.14■□□□□ 0.98
UPF2Q9HAU5 AL162727.3-201ENST00000635661 2787 ntBASIC21.14■□□□□ 0.98
UPF2Q9HAU5 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
UPF2Q9HAU5 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
UPF2Q9HAU5 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
UPF2Q9HAU5 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
UPF2Q9HAU5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
UPF2Q9HAU5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
UPF2Q9HAU5 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
UPF2Q9HAU5 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC21.14■□□□□ 0.98
UPF2Q9HAU5 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 MMP23A-201ENST00000234610 1017 ntBASIC21.14■□□□□ 0.97
UPF2Q9HAU5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC21.14■□□□□ 0.97
UPF2Q9HAU5 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 AC097374.2-201ENST00000618617 1306 ntBASIC21.13■□□□□ 0.97
UPF2Q9HAU5 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 AC026691.1-201ENST00000602502 2017 ntBASIC21.13■□□□□ 0.97
UPF2Q9HAU5 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 LINC02199-201ENST00000506655 2702 ntBASIC21.13■□□□□ 0.97
UPF2Q9HAU5 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 GCK-209ENST00000616242 2260 ntTSL 5 BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
UPF2Q9HAU5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 AL353692.3-201ENST00000407031 1396 ntBASIC21.12■□□□□ 0.97
UPF2Q9HAU5 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 IGHGP-201ENST00000390555 1178 ntBASIC21.12■□□□□ 0.97
UPF2Q9HAU5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 AC068472.1-201ENST00000474589 881 ntBASIC21.12■□□□□ 0.97
UPF2Q9HAU5 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.12■□□□□ 0.97
UPF2Q9HAU5 AC140113.3-201ENST00000605663 199 ntBASIC21.12■□□□□ 0.97
UPF2Q9HAU5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms