Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.36■□□□□ 0.85
CRNKL1Q9BZJ0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CRNKL1Q9BZJ0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.36■□□□□ 0.85
CRNKL1Q9BZJ0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CRNKL1Q9BZJ0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.36■□□□□ 0.85
CRNKL1Q9BZJ0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CRNKL1Q9BZJ0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CRNKL1Q9BZJ0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 AL691403.2-201ENST00000618460 490 ntBASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 REXO1L3P-201ENST00000622202 1288 ntBASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CRNKL1Q9BZJ0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 ALG1L5P-201ENST00000482043 771 ntBASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRNKL1Q9BZJ0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 AL078644.1-201ENST00000609881 752 ntBASIC20.33■□□□□ 0.85
CRNKL1Q9BZJ0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CRNKL1Q9BZJ0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CRNKL1Q9BZJ0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CRNKL1Q9BZJ0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CRNKL1Q9BZJ0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CRNKL1Q9BZJ0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms