Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSBP3Q9BWW4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 PRORSD1P-202ENST00000563365 2154 ntBASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 MIR940-201ENST00000401276 94 ntBASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 AC108751.1-201ENST00000490852 363 ntBASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 TERC-201ENST00000602385 541 ntBASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 AC027601.4-201ENST00000611259 610 ntBASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 AL135999.2-201ENST00000622438 1686 ntBASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 AC009053.2-201ENST00000563701 2365 ntBASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSBP3Q9BWW4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 MED15P5-201ENST00000423150 992 ntBASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 AL591424.1-201ENST00000442569 1213 ntBASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 RPS15P9-201ENST00000494093 319 ntBASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 AC034105.1-201ENST00000563488 319 ntBASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 AL671883.3-201ENST00000603274 991 ntBASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 AL353135.1-201ENST00000606729 504 ntBASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 GPR89P-201ENST00000407924 1495 ntBASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 LYSMD4-203ENST00000378904 2122 ntBASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP3Q9BWW4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms