Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
LITAFQ99732 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
LITAFQ99732 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
LITAFQ99732 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
LITAFQ99732 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LITAFQ99732 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC11.44□□□□□ -0.58
LITAFQ99732 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
LITAFQ99732 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
LITAFQ99732 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC11.44□□□□□ -0.58
LITAFQ99732 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC11.44□□□□□ -0.58
LITAFQ99732 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
LITAFQ99732 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC11.44□□□□□ -0.58
LITAFQ99732 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 SUPT20HL2-201ENST00000486479 2409 ntBASIC11.44□□□□□ -0.58
LITAFQ99732 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC11.44□□□□□ -0.58
LITAFQ99732 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
LITAFQ99732 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC11.44□□□□□ -0.58
LITAFQ99732 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC11.44□□□□□ -0.58
LITAFQ99732 AC069152.1-201ENST00000438030 544 ntBASIC11.44□□□□□ -0.58
LITAFQ99732 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC11.44□□□□□ -0.58
LITAFQ99732 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC11.44□□□□□ -0.58
LITAFQ99732 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC11.44□□□□□ -0.58
LITAFQ99732 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC11.44□□□□□ -0.58
LITAFQ99732 AC133041.1-202ENST00000642053 222 ntBASIC11.44□□□□□ -0.58
LITAFQ99732 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC11.44□□□□□ -0.58
LITAFQ99732 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
LITAFQ99732 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
LITAFQ99732 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
LITAFQ99732 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
LITAFQ99732 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC11.44□□□□□ -0.58
LITAFQ99732 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC11.44□□□□□ -0.58
LITAFQ99732 PBK-203ENST00000522944 1499 ntTSL 2 BASIC11.44□□□□□ -0.58
LITAFQ99732 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
LITAFQ99732 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
LITAFQ99732 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC11.44□□□□□ -0.58
LITAFQ99732 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LITAFQ99732 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
LITAFQ99732 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC11.43□□□□□ -0.58
LITAFQ99732 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC11.43□□□□□ -0.58
LITAFQ99732 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC11.43□□□□□ -0.58
LITAFQ99732 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
LITAFQ99732 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
LITAFQ99732 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC11.43□□□□□ -0.58
LITAFQ99732 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 AP005117.1-202ENST00000581724 1908 ntBASIC11.43□□□□□ -0.58
LITAFQ99732 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
LITAFQ99732 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
LITAFQ99732 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
LITAFQ99732 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC11.43□□□□□ -0.58
LITAFQ99732 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LITAFQ99732 ISG20-202ENST00000379224 540 ntTSL 3 BASIC11.43□□□□□ -0.58
LITAFQ99732 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC11.43□□□□□ -0.58
LITAFQ99732 GAS7-202ENST00000396115 929 ntTSL 5 BASIC11.43□□□□□ -0.58
LITAFQ99732 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC11.43□□□□□ -0.58
LITAFQ99732 PPP1R14BP3-201ENST00000509033 445 ntBASIC11.43□□□□□ -0.58
LITAFQ99732 AC112698.1-201ENST00000510299 916 ntBASIC11.43□□□□□ -0.58
LITAFQ99732 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC11.43□□□□□ -0.58
LITAFQ99732 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms