Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 AP002414.1-201ENST00000391405 1147 ntBASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 AC004706.3-202ENST00000621574 984 ntBASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 TP73-AS1-207ENST00000624167 988 ntBASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
CSPG4P5Q96PW8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 DUX4L17-201ENST00000557360 1267 ntBASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG4P5Q96PW8 AC243591.1-201ENST00000452967 1364 ntBASIC17.67■□□□□ 0.42
CSPG4P5Q96PW8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CSPG4P5Q96PW8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
CSPG4P5Q96PW8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.67■□□□□ 0.42
CSPG4P5Q96PW8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CSPG4P5Q96PW8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CSPG4P5Q96PW8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSPG4P5Q96PW8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSPG4P5Q96PW8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CSPG4P5Q96PW8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.67■□□□□ 0.42
CSPG4P5Q96PW8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSPG4P5Q96PW8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.67■□□□□ 0.42
CSPG4P5Q96PW8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSPG4P5Q96PW8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.67■□□□□ 0.42
CSPG4P5Q96PW8 AGGF1P2-201ENST00000426656 2106 ntBASIC17.67■□□□□ 0.42
CSPG4P5Q96PW8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.67■□□□□ 0.42
CSPG4P5Q96PW8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.67■□□□□ 0.42
CSPG4P5Q96PW8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.67■□□□□ 0.42
CSPG4P5Q96PW8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSPG4P5Q96PW8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms