Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CMTM3Q96MX0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.81□□□□□ -0.04
CMTM3Q96MX0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CMTM3Q96MX0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CMTM3Q96MX0 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CMTM3Q96MX0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.81□□□□□ -0.04
CMTM3Q96MX0 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CMTM3Q96MX0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CMTM3Q96MX0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CMTM3Q96MX0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CMTM3Q96MX0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
CMTM3Q96MX0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.81□□□□□ -0.04
CMTM3Q96MX0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 AC126177.1-201ENST00000547829 2218 ntBASIC14.8□□□□□ -0.04
CMTM3Q96MX0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 UNC93B2-201ENST00000285383 730 ntBASIC14.8□□□□□ -0.04
CMTM3Q96MX0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 RPS2P55-201ENST00000397318 883 ntBASIC14.8□□□□□ -0.04
CMTM3Q96MX0 MTCL1P1-201ENST00000446207 792 ntBASIC14.8□□□□□ -0.04
CMTM3Q96MX0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 AC019129.2-201ENST00000609837 1235 ntBASIC14.8□□□□□ -0.04
CMTM3Q96MX0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 AC099063.4-201ENST00000641099 1602 ntBASIC14.8□□□□□ -0.04
CMTM3Q96MX0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMTM3Q96MX0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 C2orf69P3-201ENST00000565542 1120 ntBASIC14.79□□□□□ -0.04
CMTM3Q96MX0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 AL359736.2-201ENST00000621992 437 ntBASIC14.79□□□□□ -0.04
CMTM3Q96MX0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CMTM3Q96MX0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CMTM3Q96MX0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms