Protein–RNA interactions for Protein: Q96JC9

EAF1, ELL-associated factor 1, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EAF1Q96JC9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EAF1Q96JC9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.07□□□□□ -0.16
EAF1Q96JC9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EAF1Q96JC9 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
EAF1Q96JC9 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
EAF1Q96JC9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
EAF1Q96JC9 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
EAF1Q96JC9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
EAF1Q96JC9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EAF1Q96JC9 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
EAF1Q96JC9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EAF1Q96JC9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EAF1Q96JC9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
EAF1Q96JC9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.06□□□□□ -0.16
EAF1Q96JC9 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.06□□□□□ -0.16
EAF1Q96JC9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
EAF1Q96JC9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
EAF1Q96JC9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EAF1Q96JC9 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.06□□□□□ -0.16
EAF1Q96JC9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.06□□□□□ -0.16
EAF1Q96JC9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EAF1Q96JC9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EAF1Q96JC9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.06□□□□□ -0.16
EAF1Q96JC9 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.06□□□□□ -0.16
EAF1Q96JC9 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
EAF1Q96JC9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
EAF1Q96JC9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.06□□□□□ -0.16
EAF1Q96JC9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EAF1Q96JC9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.06□□□□□ -0.16
EAF1Q96JC9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.06□□□□□ -0.16
EAF1Q96JC9 ABCD1P5-201ENST00000445663 754 ntBASIC14.06□□□□□ -0.16
EAF1Q96JC9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
EAF1Q96JC9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.06□□□□□ -0.16
EAF1Q96JC9 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EAF1Q96JC9 AL139327.4-201ENST00000612362 153 ntBASIC14.06□□□□□ -0.16
EAF1Q96JC9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
EAF1Q96JC9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.06□□□□□ -0.16
EAF1Q96JC9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
EAF1Q96JC9 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.06□□□□□ -0.16
EAF1Q96JC9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EAF1Q96JC9 RN7SL832P-201ENST00000607781 1756 ntBASIC14.06□□□□□ -0.16
EAF1Q96JC9 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
EAF1Q96JC9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
EAF1Q96JC9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.06□□□□□ -0.16
EAF1Q96JC9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.06□□□□□ -0.16
EAF1Q96JC9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EAF1Q96JC9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.06□□□□□ -0.16
EAF1Q96JC9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.05□□□□□ -0.16
EAF1Q96JC9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 AL138688.1-201ENST00000624851 1594 ntBASIC14.05□□□□□ -0.16
EAF1Q96JC9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 STK25P1-201ENST00000585406 838 ntBASIC14.05□□□□□ -0.16
EAF1Q96JC9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 AC073592.5-201ENST00000624854 528 ntBASIC14.05□□□□□ -0.16
EAF1Q96JC9 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
EAF1Q96JC9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
EAF1Q96JC9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms