Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NCLNQ969V3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCLNQ969V3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCLNQ969V3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCLNQ969V3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.73■□□□□ 0.27
NCLNQ969V3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NCLNQ969V3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.73■□□□□ 0.27
NCLNQ969V3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCLNQ969V3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NCLNQ969V3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCLNQ969V3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCLNQ969V3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.72■□□□□ 0.27
NCLNQ969V3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCLNQ969V3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.72■□□□□ 0.27
NCLNQ969V3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCLNQ969V3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.72■□□□□ 0.27
NCLNQ969V3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCLNQ969V3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCLNQ969V3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NCLNQ969V3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCLNQ969V3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NCLNQ969V3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCLNQ969V3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.72■□□□□ 0.27
NCLNQ969V3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCLNQ969V3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCLNQ969V3 AL118508.1-201ENST00000613502 2345 ntBASIC16.72■□□□□ 0.27
NCLNQ969V3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCLNQ969V3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
NCLNQ969V3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCLNQ969V3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCLNQ969V3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.72■□□□□ 0.27
NCLNQ969V3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCLNQ969V3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.72■□□□□ 0.27
NCLNQ969V3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.72■□□□□ 0.27
NCLNQ969V3 AL353801.3-201ENST00000609898 542 ntBASIC16.72■□□□□ 0.27
NCLNQ969V3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.72■□□□□ 0.27
NCLNQ969V3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCLNQ969V3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.72■□□□□ 0.27
NCLNQ969V3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCLNQ969V3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NCLNQ969V3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCLNQ969V3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCLNQ969V3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.72■□□□□ 0.27
NCLNQ969V3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCLNQ969V3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.72■□□□□ 0.27
NCLNQ969V3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
NCLNQ969V3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCLNQ969V3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NCLNQ969V3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCLNQ969V3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCLNQ969V3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
NCLNQ969V3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
NCLNQ969V3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCLNQ969V3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
NCLNQ969V3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCLNQ969V3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NCLNQ969V3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCLNQ969V3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.71■□□□□ 0.27
NCLNQ969V3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCLNQ969V3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.71■□□□□ 0.27
NCLNQ969V3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCLNQ969V3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
NCLNQ969V3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
NCLNQ969V3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NCLNQ969V3 DUSP5P1-201ENST00000441325 1139 ntBASIC16.71■□□□□ 0.27
NCLNQ969V3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NCLNQ969V3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.71■□□□□ 0.27
NCLNQ969V3 AC112698.1-201ENST00000510299 916 ntBASIC16.71■□□□□ 0.27
NCLNQ969V3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NCLNQ969V3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.71■□□□□ 0.27
NCLNQ969V3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.71■□□□□ 0.27
NCLNQ969V3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.71■□□□□ 0.27
NCLNQ969V3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.71■□□□□ 0.27
NCLNQ969V3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.71■□□□□ 0.27
NCLNQ969V3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.71■□□□□ 0.27
NCLNQ969V3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NCLNQ969V3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NCLNQ969V3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCLNQ969V3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
NCLNQ969V3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
NCLNQ969V3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCLNQ969V3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.71■□□□□ 0.27
NCLNQ969V3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.71■□□□□ 0.27
NCLNQ969V3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NCLNQ969V3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NCLNQ969V3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NCLNQ969V3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NCLNQ969V3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NCLNQ969V3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCLNQ969V3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.71■□□□□ 0.27
NCLNQ969V3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.71■□□□□ 0.27
NCLNQ969V3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.71■□□□□ 0.26
NCLNQ969V3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
NCLNQ969V3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.26
NCLNQ969V3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NCLNQ969V3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
NCLNQ969V3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NCLNQ969V3 REXO1L11P-201ENST00000620964 1927 ntBASIC16.7■□□□□ 0.26
NCLNQ969V3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NCLNQ969V3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms