Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM54Q969K7 AC005915.1-201ENST00000624912 2018 ntBASIC15.12■□□□□ 0.01
TMEM54Q969K7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM54Q969K7 AC105020.1-201ENST00000435356 2205 ntBASIC15.12■□□□□ 0.01
TMEM54Q969K7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM54Q969K7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TMEM54Q969K7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.12■□□□□ 0.01
TMEM54Q969K7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.12■□□□□ 0.01
TMEM54Q969K7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.12■□□□□ 0.01
TMEM54Q969K7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
TMEM54Q969K7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM54Q969K7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TMEM54Q969K7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM54Q969K7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.11■□□□□ 0.01
TMEM54Q969K7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 AC073621.1-201ENST00000392730 636 ntBASIC15.11■□□□□ 0.01
TMEM54Q969K7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 HNRNPDP1-201ENST00000439535 754 ntBASIC15.11■□□□□ 0.01
TMEM54Q969K7 PAWRP1-201ENST00000451083 565 ntBASIC15.11■□□□□ 0.01
TMEM54Q969K7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.11■□□□□ 0.01
TMEM54Q969K7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.11■□□□□ 0.01
TMEM54Q969K7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.11■□□□□ 0.01
TMEM54Q969K7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.11■□□□□ 0.01
TMEM54Q969K7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TMEM54Q969K7 AL805961.1-202ENST00000641562 540 ntBASIC15.11■□□□□ 0.01
TMEM54Q969K7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM54Q969K7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM54Q969K7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TMEM54Q969K7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 TUBB8P12-201ENST00000308911 1335 ntBASIC15.11■□□□□ 0.01
TMEM54Q969K7 TUBB7P-202ENST00000428444 1305 ntBASIC15.11■□□□□ 0.01
TMEM54Q969K7 TUBB8P7-204ENST00000567960 1332 ntBASIC15.11■□□□□ 0.01
TMEM54Q969K7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TMEM54Q969K7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TMEM54Q969K7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM54Q969K7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.11■□□□□ 0.01
TMEM54Q969K7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM54Q969K7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM54Q969K7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM54Q969K7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM54Q969K7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM54Q969K7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM54Q969K7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.1■□□□□ 0.01
TMEM54Q969K7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEM54Q969K7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TMEM54Q969K7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEM54Q969K7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.1■□□□□ 0.01
TMEM54Q969K7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.1■□□□□ 0.01
TMEM54Q969K7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.1■□□□□ 0.01
TMEM54Q969K7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.1■□□□□ 0.01
TMEM54Q969K7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEM54Q969K7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEM54Q969K7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEM54Q969K7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.1■□□□□ 0.01
TMEM54Q969K7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TMEM54Q969K7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.1■□□□□ 0.01
TMEM54Q969K7 AC008735.5-201ENST00000623544 497 ntBASIC15.1■□□□□ 0.01
TMEM54Q969K7 AF228730.7-201ENST00000641842 219 ntBASIC15.1■□□□□ 0.01
TMEM54Q969K7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM54Q969K7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
TMEM54Q969K7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM54Q969K7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TMEM54Q969K7 PCDHA12-202ENST00000613593 2588 ntBASIC15.1■□□□□ 0.01
TMEM54Q969K7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM54Q969K7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM54Q969K7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM54Q969K7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEM54Q969K7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TMEM54Q969K7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TMEM54Q969K7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM54Q969K7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM54Q969K7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TMEM54Q969K7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM54Q969K7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM54Q969K7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM54Q969K7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM54Q969K7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.09■□□□□ 0.01
TMEM54Q969K7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TMEM54Q969K7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM54Q969K7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM54Q969K7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM54Q969K7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM54Q969K7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms