Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
AP3S1Q92572 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
AP3S1Q92572 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 AC023824.1-201ENST00000562945 2975 ntBASIC15.19■□□□□ 0.02
AP3S1Q92572 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.19■□□□□ 0.02
AP3S1Q92572 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.19■□□□□ 0.02
AP3S1Q92572 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.19■□□□□ 0.02
AP3S1Q92572 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.19■□□□□ 0.02
AP3S1Q92572 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.19■□□□□ 0.02
AP3S1Q92572 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.19■□□□□ 0.02
AP3S1Q92572 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.19■□□□□ 0.02
AP3S1Q92572 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.19■□□□□ 0.02
AP3S1Q92572 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
AP3S1Q92572 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.19■□□□□ 0.02
AP3S1Q92572 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 AC007326.2-201ENST00000624224 7579 ntBASIC15.19■□□□□ 0.02
AP3S1Q92572 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.19■□□□□ 0.02
AP3S1Q92572 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
AP3S1Q92572 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.19■□□□□ 0.02
AP3S1Q92572 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
AP3S1Q92572 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
AP3S1Q92572 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.19■□□□□ 0.02
AP3S1Q92572 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3S1Q92572 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
AP3S1Q92572 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.18■□□□□ 0.02
AP3S1Q92572 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.18■□□□□ 0.02
AP3S1Q92572 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.18■□□□□ 0.02
AP3S1Q92572 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
AP3S1Q92572 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.18■□□□□ 0.02
AP3S1Q92572 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.18■□□□□ 0.02
AP3S1Q92572 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.18■□□□□ 0.02
AP3S1Q92572 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.18■□□□□ 0.02
AP3S1Q92572 AC069152.1-201ENST00000438030 544 ntBASIC15.18■□□□□ 0.02
AP3S1Q92572 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.18■□□□□ 0.02
AP3S1Q92572 AC113404.2-201ENST00000507884 177 ntBASIC15.18■□□□□ 0.02
AP3S1Q92572 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.18■□□□□ 0.02
AP3S1Q92572 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.18■□□□□ 0.02
AP3S1Q92572 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.18■□□□□ 0.02
AP3S1Q92572 AC233263.1-201ENST00000578059 224 ntBASIC15.18■□□□□ 0.02
AP3S1Q92572 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.18■□□□□ 0.02
AP3S1Q92572 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.18■□□□□ 0.02
AP3S1Q92572 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.18■□□□□ 0.02
AP3S1Q92572 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.18■□□□□ 0.02
AP3S1Q92572 AC006538.1-201ENST00000567905 1585 ntBASIC15.18■□□□□ 0.02
AP3S1Q92572 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
AP3S1Q92572 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.18■□□□□ 0.02
AP3S1Q92572 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.18■□□□□ 0.02
AP3S1Q92572 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.18■□□□□ 0.02
AP3S1Q92572 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.18■□□□□ 0.02
AP3S1Q92572 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.18■□□□□ 0.02
AP3S1Q92572 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 AC092384.3-202ENST00000564646 2873 ntBASIC15.18■□□□□ 0.02
AP3S1Q92572 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP3S1Q92572 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S1Q92572 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S1Q92572 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
AP3S1Q92572 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
AP3S1Q92572 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
AP3S1Q92572 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms