Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX1Q92499 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.28■□□□□ 0.52
DDX1Q92499 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX1Q92499 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.28■□□□□ 0.52
DDX1Q92499 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.28■□□□□ 0.52
DDX1Q92499 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX1Q92499 AL356309.3-201ENST00000624132 1934 ntBASIC18.28■□□□□ 0.52
DDX1Q92499 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DDX1Q92499 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
DDX1Q92499 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.28■□□□□ 0.52
DDX1Q92499 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DDX1Q92499 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.28■□□□□ 0.52
DDX1Q92499 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DDX1Q92499 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.28■□□□□ 0.52
DDX1Q92499 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.28■□□□□ 0.52
DDX1Q92499 AL353135.1-201ENST00000606729 504 ntBASIC18.28■□□□□ 0.52
DDX1Q92499 AL139288.1-201ENST00000623748 933 ntBASIC18.28■□□□□ 0.52
DDX1Q92499 AL022326.1-202ENST00000641533 845 ntBASIC18.28■□□□□ 0.52
DDX1Q92499 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
DDX1Q92499 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX1Q92499 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
DDX1Q92499 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX1Q92499 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX1Q92499 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.28■□□□□ 0.52
DDX1Q92499 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX1Q92499 AC084018.2-201ENST00000613093 2607 ntBASIC18.28■□□□□ 0.52
DDX1Q92499 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.28■□□□□ 0.52
DDX1Q92499 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DDX1Q92499 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX1Q92499 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX1Q92499 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX1Q92499 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX1Q92499 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX1Q92499 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.27■□□□□ 0.52
DDX1Q92499 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX1Q92499 AL590787.1-201ENST00000568856 1315 ntBASIC18.27■□□□□ 0.52
DDX1Q92499 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
DDX1Q92499 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DDX1Q92499 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DDX1Q92499 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DDX1Q92499 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.27■□□□□ 0.52
DDX1Q92499 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX1Q92499 AF238378.1-201ENST00000526806 358 ntBASIC18.27■□□□□ 0.52
DDX1Q92499 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DDX1Q92499 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.27■□□□□ 0.52
DDX1Q92499 SART3-203ENST00000546611 1184 ntBASIC18.27■□□□□ 0.52
DDX1Q92499 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.27■□□□□ 0.52
DDX1Q92499 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.27■□□□□ 0.52
DDX1Q92499 AC078925.2-201ENST00000624013 1973 ntBASIC18.27■□□□□ 0.52
DDX1Q92499 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.27■□□□□ 0.52
DDX1Q92499 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DDX1Q92499 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX1Q92499 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DDX1Q92499 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.27■□□□□ 0.52
DDX1Q92499 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.27■□□□□ 0.52
DDX1Q92499 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.27■□□□□ 0.51
DDX1Q92499 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.27■□□□□ 0.51
DDX1Q92499 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
DDX1Q92499 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
DDX1Q92499 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
DDX1Q92499 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.26■□□□□ 0.51
DDX1Q92499 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX1Q92499 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX1Q92499 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DDX1Q92499 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
DDX1Q92499 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.26■□□□□ 0.51
DDX1Q92499 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DDX1Q92499 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX1Q92499 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX1Q92499 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX1Q92499 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
DDX1Q92499 MIR940-201ENST00000401276 94 ntBASIC18.26■□□□□ 0.51
DDX1Q92499 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
DDX1Q92499 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.26■□□□□ 0.51
DDX1Q92499 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.26■□□□□ 0.51
DDX1Q92499 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
DDX1Q92499 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.26■□□□□ 0.51
DDX1Q92499 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
DDX1Q92499 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DDX1Q92499 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX1Q92499 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DDX1Q92499 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX1Q92499 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.26■□□□□ 0.51
DDX1Q92499 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX1Q92499 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.26■□□□□ 0.51
DDX1Q92499 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.25■□□□□ 0.51
DDX1Q92499 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
DDX1Q92499 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX1Q92499 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX1Q92499 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
DDX1Q92499 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX1Q92499 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.25■□□□□ 0.51
DDX1Q92499 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
DDX1Q92499 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX1Q92499 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX1Q92499 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.25■□□□□ 0.51
DDX1Q92499 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX1Q92499 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.25■□□□□ 0.51
DDX1Q92499 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX1Q92499 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms