Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RDH11Q8TC12 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
RDH11Q8TC12 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RDH11Q8TC12 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RDH11Q8TC12 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.93■□□□□ 0.3
RDH11Q8TC12 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.93■□□□□ 0.3
RDH11Q8TC12 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.93■□□□□ 0.3
RDH11Q8TC12 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.93■□□□□ 0.3
RDH11Q8TC12 AL445228.2-201ENST00000605589 952 ntBASIC16.93■□□□□ 0.3
RDH11Q8TC12 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RDH11Q8TC12 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.93■□□□□ 0.3
RDH11Q8TC12 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RDH11Q8TC12 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RDH11Q8TC12 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RDH11Q8TC12 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RDH11Q8TC12 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RDH11Q8TC12 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.93■□□□□ 0.3
RDH11Q8TC12 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.93■□□□□ 0.3
RDH11Q8TC12 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RDH11Q8TC12 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RDH11Q8TC12 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RDH11Q8TC12 AC026691.1-201ENST00000602502 2017 ntBASIC16.92■□□□□ 0.3
RDH11Q8TC12 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.92■□□□□ 0.3
RDH11Q8TC12 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.92■□□□□ 0.3
RDH11Q8TC12 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RDH11Q8TC12 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RDH11Q8TC12 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RDH11Q8TC12 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RDH11Q8TC12 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.92■□□□□ 0.3
RDH11Q8TC12 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RDH11Q8TC12 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RDH11Q8TC12 AC092171.3-201ENST00000610122 2651 ntBASIC16.92■□□□□ 0.3
RDH11Q8TC12 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RDH11Q8TC12 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RDH11Q8TC12 KLF4P1-201ENST00000412782 1185 ntBASIC16.92■□□□□ 0.3
RDH11Q8TC12 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RDH11Q8TC12 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RDH11Q8TC12 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.92■□□□□ 0.3
RDH11Q8TC12 AC063952.2-201ENST00000498792 1227 ntBASIC16.92■□□□□ 0.3
RDH11Q8TC12 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.92■□□□□ 0.3
RDH11Q8TC12 AC087388.1-201ENST00000571370 1112 ntBASIC16.92■□□□□ 0.3
RDH11Q8TC12 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.92■□□□□ 0.3
RDH11Q8TC12 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RDH11Q8TC12 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RDH11Q8TC12 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.92■□□□□ 0.3
RDH11Q8TC12 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
RDH11Q8TC12 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
RDH11Q8TC12 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RDH11Q8TC12 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RDH11Q8TC12 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RDH11Q8TC12 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RDH11Q8TC12 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RDH11Q8TC12 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RDH11Q8TC12 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.92■□□□□ 0.3
RDH11Q8TC12 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
RDH11Q8TC12 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.92■□□□□ 0.3
RDH11Q8TC12 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RDH11Q8TC12 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.91■□□□□ 0.3
RDH11Q8TC12 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RDH11Q8TC12 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RDH11Q8TC12 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RDH11Q8TC12 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RDH11Q8TC12 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RDH11Q8TC12 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RDH11Q8TC12 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RDH11Q8TC12 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RDH11Q8TC12 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RDH11Q8TC12 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RDH11Q8TC12 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.91■□□□□ 0.3
RDH11Q8TC12 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.91■□□□□ 0.3
RDH11Q8TC12 LINC01238-205ENST00000567549 1107 ntBASIC16.91■□□□□ 0.3
RDH11Q8TC12 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RDH11Q8TC12 IGHV3-41-201ENST00000613121 348 ntBASIC16.91■□□□□ 0.3
RDH11Q8TC12 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.91■□□□□ 0.3
RDH11Q8TC12 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RDH11Q8TC12 AD001527.2-201ENST00000622994 785 ntBASIC16.91■□□□□ 0.3
RDH11Q8TC12 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RDH11Q8TC12 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.91■□□□□ 0.3
RDH11Q8TC12 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.91■□□□□ 0.3
RDH11Q8TC12 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RDH11Q8TC12 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RDH11Q8TC12 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RDH11Q8TC12 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RDH11Q8TC12 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
RDH11Q8TC12 AC132938.5-201ENST00000624980 1813 ntBASIC16.91■□□□□ 0.3
RDH11Q8TC12 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.91■□□□□ 0.3
RDH11Q8TC12 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RDH11Q8TC12 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RDH11Q8TC12 HLA-A-202ENST00000376806 1854 ntBASIC16.9■□□□□ 0.3
RDH11Q8TC12 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RDH11Q8TC12 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RDH11Q8TC12 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RDH11Q8TC12 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RDH11Q8TC12 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RDH11Q8TC12 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RDH11Q8TC12 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RDH11Q8TC12 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.9■□□□□ 0.3
RDH11Q8TC12 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RDH11Q8TC12 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RDH11Q8TC12 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms