Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 AC079776.2-201ENST00000641154 1609 ntBASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.13■□□□□ 0.81
SMARCC2Q8TAQ2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 AC092068.3-201ENST00000587894 2016 ntBASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 HLA-A-201ENST00000376802 1334 ntBASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 BX005266.1-201ENST00000473402 457 ntBASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 AC021087.4-201ENST00000563761 564 ntBASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 FRMD8P1-201ENST00000440433 1524 ntBASIC20.12■□□□□ 0.81
SMARCC2Q8TAQ2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 SPDYE21P-201ENST00000413323 827 ntBASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 AL031284.1-201ENST00000419297 478 ntBASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 AC018712.1-201ENST00000455767 687 ntBASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 AP001005.1-201ENST00000571755 1248 ntBASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCC2Q8TAQ2 SIGLEC16-201ENST00000599858 1437 ntBASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms