Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 AL049757.1-201ENST00000616842 1596 ntBASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
BBS1Q8NFJ9 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 TSPY5P-201ENST00000426936 936 ntBASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 AC005363.2-201ENST00000618631 242 ntBASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 AC133561.5-201ENST00000635547 218 ntBASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 AC125634.1-201ENST00000438758 1403 ntBASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 KRT8P10-201ENST00000450021 1447 ntBASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.49■□□□□ 0.07
BBS1Q8NFJ9 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 KRT18P57-201ENST00000443599 1254 ntBASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.48■□□□□ 0.07
BBS1Q8NFJ9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms