Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CARMIL3Q8ND23 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CARMIL3Q8ND23 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.02
CARMIL3Q8ND23 AC008677.1-201ENST00000519230 1561 ntBASIC21.39■■□□□ 1.02
CARMIL3Q8ND23 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC21.39■■□□□ 1.02
CARMIL3Q8ND23 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.39■■□□□ 1.02
CARMIL3Q8ND23 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.39■■□□□ 1.02
CARMIL3Q8ND23 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.02
CARMIL3Q8ND23 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CARMIL3Q8ND23 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
CARMIL3Q8ND23 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
CARMIL3Q8ND23 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC21.39■■□□□ 1.02
CARMIL3Q8ND23 AC140878.1-201ENST00000565277 250 ntBASIC21.39■■□□□ 1.02
CARMIL3Q8ND23 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CARMIL3Q8ND23 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.39■■□□□ 1.02
CARMIL3Q8ND23 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CARMIL3Q8ND23 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CARMIL3Q8ND23 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
CARMIL3Q8ND23 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CARMIL3Q8ND23 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CARMIL3Q8ND23 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CARMIL3Q8ND23 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 AC109635.5-201ENST00000533593 962 ntBASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 KRT8P23-201ENST00000560090 1207 ntBASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 AC084121.4-201ENST00000641598 221 ntBASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 AF228730.8-201ENST00000642140 221 ntBASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CARMIL3Q8ND23 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 IGHV3-62-201ENST00000520057 340 ntBASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 SLC25A39P2-201ENST00000537614 270 ntBASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 LINC01225-203ENST00000563550 1244 ntBASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 AC026150.2-201ENST00000564693 1156 ntBASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 AC008761.3-201ENST00000624803 892 ntBASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 AL133373.2-201ENST00000623187 2828 ntBASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 NOC2LP2-201ENST00000407594 1944 ntBASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CARMIL3Q8ND23 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 FAM207CP-201ENST00000443486 507 ntBASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 MEIS3P1-201ENST00000495167 958 ntBASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 GNAS-203ENST00000306120 1878 ntBASIC21.36■■□□□ 1.01
CARMIL3Q8ND23 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms