Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM35BQ8NCS4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM35BQ8NCS4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM35BQ8NCS4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM35BQ8NCS4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM35BQ8NCS4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM35BQ8NCS4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.22■□□□□ 0.51
TMEM35BQ8NCS4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM35BQ8NCS4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM35BQ8NCS4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TMEM35BQ8NCS4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TMEM35BQ8NCS4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM35BQ8NCS4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM35BQ8NCS4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM35BQ8NCS4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM35BQ8NCS4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM35BQ8NCS4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.21■□□□□ 0.51
TMEM35BQ8NCS4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM35BQ8NCS4 AC064862.7-201ENST00000604520 867 ntBASIC18.21■□□□□ 0.51
TMEM35BQ8NCS4 FRMD8P1-201ENST00000440433 1524 ntBASIC18.21■□□□□ 0.51
TMEM35BQ8NCS4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TMEM35BQ8NCS4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TMEM35BQ8NCS4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM35BQ8NCS4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM35BQ8NCS4 PCDHA12-202ENST00000613593 2588 ntBASIC18.21■□□□□ 0.51
TMEM35BQ8NCS4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM35BQ8NCS4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
TMEM35BQ8NCS4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 UNC93B7-201ENST00000509439 705 ntBASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 MTDHP4-201ENST00000600287 670 ntBASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM35BQ8NCS4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 DUSP5P1-201ENST00000441325 1139 ntBASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM35BQ8NCS4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 AC139887.3-201ENST00000568585 713 ntBASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms