Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 TP73-AS1-207ENST00000624167 988 ntBASIC17.63■□□□□ 0.41
ATPAF2Q8N5M1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
ATPAF2Q8N5M1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATPAF2Q8N5M1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATPAF2Q8N5M1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATPAF2Q8N5M1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.63■□□□□ 0.41
ATPAF2Q8N5M1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATPAF2Q8N5M1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATPAF2Q8N5M1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATPAF2Q8N5M1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
ATPAF2Q8N5M1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATPAF2Q8N5M1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.63■□□□□ 0.41
ATPAF2Q8N5M1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ATPAF2Q8N5M1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATPAF2Q8N5M1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ATPAF2Q8N5M1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATPAF2Q8N5M1 AC080080.1-201ENST00000625121 2420 ntBASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 AL353135.1-201ENST00000606729 504 ntBASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 AL139424.1-201ENST00000607572 797 ntBASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF2Q8N5M1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 AC020916.1-201ENST00000587762 1774 ntBASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 AC060834.1-201ENST00000443027 2032 ntBASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 LAGE3P1-201ENST00000425356 484 ntBASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 AC079781.3-201ENST00000449110 356 ntBASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATPAF2Q8N5M1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATPAF2Q8N5M1 AC092053.1-201ENST00000605787 1936 ntBASIC17.6■□□□□ 0.41
ATPAF2Q8N5M1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATPAF2Q8N5M1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
ATPAF2Q8N5M1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATPAF2Q8N5M1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.6■□□□□ 0.41
ATPAF2Q8N5M1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.6■□□□□ 0.41
ATPAF2Q8N5M1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.6■□□□□ 0.41
ATPAF2Q8N5M1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ATPAF2Q8N5M1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms