Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.56■□□□□ 0.4
SIX5Q8N196 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SIX5Q8N196 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIX5Q8N196 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.56■□□□□ 0.4
SIX5Q8N196 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SIX5Q8N196 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.56■□□□□ 0.4
SIX5Q8N196 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.56■□□□□ 0.4
SIX5Q8N196 SLC25A6P2-201ENST00000497974 877 ntBASIC17.56■□□□□ 0.4
SIX5Q8N196 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
SIX5Q8N196 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.56■□□□□ 0.4
SIX5Q8N196 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SIX5Q8N196 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.56■□□□□ 0.4
SIX5Q8N196 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SIX5Q8N196 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIX5Q8N196 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SIX5Q8N196 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIX5Q8N196 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIX5Q8N196 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIX5Q8N196 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SIX5Q8N196 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.56■□□□□ 0.4
SIX5Q8N196 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SIX5Q8N196 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.55■□□□□ 0.4
SIX5Q8N196 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
SIX5Q8N196 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SIX5Q8N196 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.55■□□□□ 0.4
SIX5Q8N196 AC008677.1-201ENST00000519230 1561 ntBASIC17.55■□□□□ 0.4
SIX5Q8N196 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 OR8S1-201ENST00000310194 1080 ntBASIC17.55■□□□□ 0.4
SIX5Q8N196 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.55■□□□□ 0.4
SIX5Q8N196 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.55■□□□□ 0.4
SIX5Q8N196 MEIS3P1-201ENST00000495167 958 ntBASIC17.55■□□□□ 0.4
SIX5Q8N196 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.55■□□□□ 0.4
SIX5Q8N196 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.55■□□□□ 0.4
SIX5Q8N196 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.55■□□□□ 0.4
SIX5Q8N196 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SIX5Q8N196 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.55■□□□□ 0.4
SIX5Q8N196 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.55■□□□□ 0.4
SIX5Q8N196 AL096828.2-201ENST00000567259 1965 ntBASIC17.55■□□□□ 0.4
SIX5Q8N196 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SIX5Q8N196 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIX5Q8N196 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SIX5Q8N196 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SIX5Q8N196 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.54■□□□□ 0.4
SIX5Q8N196 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SIX5Q8N196 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SIX5Q8N196 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIX5Q8N196 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SIX5Q8N196 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIX5Q8N196 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.54■□□□□ 0.4
SIX5Q8N196 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.54■□□□□ 0.4
SIX5Q8N196 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.54■□□□□ 0.4
SIX5Q8N196 IGHV3-62-201ENST00000520057 340 ntBASIC17.54■□□□□ 0.4
SIX5Q8N196 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.54■□□□□ 0.4
SIX5Q8N196 RARRES2P8-201ENST00000566335 367 ntBASIC17.54■□□□□ 0.4
SIX5Q8N196 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.54■□□□□ 0.4
SIX5Q8N196 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.54■□□□□ 0.4
SIX5Q8N196 AL358472.5-202ENST00000641448 1267 ntBASIC17.54■□□□□ 0.4
SIX5Q8N196 AL645728.2-201ENST00000641974 660 ntBASIC17.54■□□□□ 0.4
SIX5Q8N196 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIX5Q8N196 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.54■□□□□ 0.4
SIX5Q8N196 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIX5Q8N196 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIX5Q8N196 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIX5Q8N196 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.54■□□□□ 0.4
SIX5Q8N196 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SIX5Q8N196 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIX5Q8N196 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SIX5Q8N196 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIX5Q8N196 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.54■□□□□ 0.4
SIX5Q8N196 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIX5Q8N196 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIX5Q8N196 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIX5Q8N196 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
SIX5Q8N196 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SIX5Q8N196 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIX5Q8N196 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIX5Q8N196 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SIX5Q8N196 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.53■□□□□ 0.4
SIX5Q8N196 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIX5Q8N196 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms