Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 LINC00982-205ENST00000420957 435 ntBASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 UNC93B6-202ENST00000528242 690 ntBASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 TERC-201ENST00000602385 541 ntBASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM48Q8IWZ4 AC006504.4-201ENST00000592118 1568 ntBASIC16.89■□□□□ 0.3
TRIM48Q8IWZ4 AL355312.1-201ENST00000407115 2176 ntBASIC16.89■□□□□ 0.3
TRIM48Q8IWZ4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRIM48Q8IWZ4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 MIR574-201ENST00000385209 96 ntBASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 AC145285.3-201ENST00000564603 959 ntBASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM48Q8IWZ4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 AC073621.1-201ENST00000392730 636 ntBASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 MED15P5-201ENST00000423150 992 ntBASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 AC108751.1-201ENST00000490852 363 ntBASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 POLD2P1-201ENST00000511220 997 ntBASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 AC027601.4-201ENST00000611259 610 ntBASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM48Q8IWZ4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms