Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 FSCN1P1-201ENST00000568912 1481 ntBASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 SNX18-202ENST00000343017 3140 ntBASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 KRT8P7-201ENST00000533003 1432 ntBASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 KRT18P23-201ENST00000435622 1283 ntBASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 MIR4674-201ENST00000582457 87 ntBASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 AF186192.3-201ENST00000583427 947 ntBASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 AC073195.1-201ENST00000607241 877 ntBASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.12■□□□□ 0.01
LYSMD2Q8IV50 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 RNA5SP413-201ENST00000516373 109 ntBASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 AC124947.2-201ENST00000547118 1133 ntBASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 AC104581.4-201ENST00000623126 3052 ntBASIC15.11■□□□□ 0.01
LYSMD2Q8IV50 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms