Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 MIR1224-201ENST00000408193 85 ntBASIC17.91■□□□□ 0.46
RFX6Q8HWS3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 ATP5G2P1-201ENST00000433580 426 ntBASIC17.91■□□□□ 0.46
RFX6Q8HWS3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 AC010331.1-201ENST00000611423 582 ntBASIC17.91■□□□□ 0.46
RFX6Q8HWS3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 AC105020.1-201ENST00000435356 2205 ntBASIC17.91■□□□□ 0.46
RFX6Q8HWS3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 PMPCAP1-201ENST00000508114 1576 ntBASIC17.91■□□□□ 0.46
RFX6Q8HWS3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX6Q8HWS3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 AC092068.3-201ENST00000587894 2016 ntBASIC17.9■□□□□ 0.46
RFX6Q8HWS3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX6Q8HWS3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RFX6Q8HWS3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
RFX6Q8HWS3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RFX6Q8HWS3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RFX6Q8HWS3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 AC138894.3-201ENST00000603787 634 ntBASIC17.89■□□□□ 0.45
RFX6Q8HWS3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.89■□□□□ 0.45
RFX6Q8HWS3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RFX6Q8HWS3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.88■□□□□ 0.45
RFX6Q8HWS3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.88■□□□□ 0.45
RFX6Q8HWS3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX6Q8HWS3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFX6Q8HWS3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms