Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FAM90A1Q86YD7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FAM90A1Q86YD7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
FAM90A1Q86YD7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.45□□□□□ -0.1
FAM90A1Q86YD7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FAM90A1Q86YD7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.45□□□□□ -0.1
FAM90A1Q86YD7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 RPS2P28-201ENST00000314255 741 ntBASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 FDX1P1-201ENST00000449115 551 ntBASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FAM90A1Q86YD7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 HLA-A-201ENST00000376802 1334 ntBASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 RNA5SP419-201ENST00000515908 135 ntBASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 AC012640.2-201ENST00000561606 901 ntBASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 AP001005.1-201ENST00000571755 1248 ntBASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 AL049840.3-201ENST00000602669 611 ntBASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 MIR7706-201ENST00000613747 67 ntBASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FAM90A1Q86YD7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FAM90A1Q86YD7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms