Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC21.33■■□□□ 1.01
UBE3BQ7Z3V4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC21.33■■□□□ 1.01
UBE3BQ7Z3V4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC21.33■■□□□ 1.01
UBE3BQ7Z3V4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
UBE3BQ7Z3V4 AP002472.1-201ENST00000577490 586 ntBASIC21.33■■□□□ 1.01
UBE3BQ7Z3V4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC21.33■■□□□ 1.01
UBE3BQ7Z3V4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21.33■■□□□ 1.01
UBE3BQ7Z3V4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC21.33■■□□□ 1.01
UBE3BQ7Z3V4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
UBE3BQ7Z3V4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.33■■□□□ 1.01
UBE3BQ7Z3V4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBE3BQ7Z3V4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
UBE3BQ7Z3V4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
UBE3BQ7Z3V4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
UBE3BQ7Z3V4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
UBE3BQ7Z3V4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
UBE3BQ7Z3V4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
UBE3BQ7Z3V4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
UBE3BQ7Z3V4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
UBE3BQ7Z3V4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
UBE3BQ7Z3V4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
UBE3BQ7Z3V4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBE3BQ7Z3V4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBE3BQ7Z3V4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms