Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 AC133963.1-201ENST00000504166 1679 ntBASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFWD3Q6PCD5 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 KRT18P27-201ENST00000427733 1299 ntBASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 AC006557.2-201ENST00000592985 1240 ntBASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 AC004706.3-202ENST00000621574 984 ntBASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 AC117500.6-201ENST00000624871 588 ntBASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 NCF1C-201ENST00000438382 1427 ntBASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 AC006504.4-201ENST00000592118 1568 ntBASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 AL118508.1-201ENST00000613502 2345 ntBASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD3Q6PCD5 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 AC073621.1-201ENST00000392730 636 ntBASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 ELK2BP-201ENST00000415014 1224 ntBASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 AL356488.2-201ENST00000602755 427 ntBASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 AL135999.2-201ENST00000622438 1686 ntBASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD3Q6PCD5 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.92■□□□□ 0.46
RFWD3Q6PCD5 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFWD3Q6PCD5 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFWD3Q6PCD5 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.92■□□□□ 0.46
RFWD3Q6PCD5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.92■□□□□ 0.46
RFWD3Q6PCD5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RFWD3Q6PCD5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.92■□□□□ 0.46
RFWD3Q6PCD5 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RFWD3Q6PCD5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms