Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 AC246785.2-201ENST00000432512 513 ntBASIC17.57■□□□□ 0.4
CASC4Q6P4E1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.57■□□□□ 0.4
CASC4Q6P4E1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.56■□□□□ 0.4
CASC4Q6P4E1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 AC009533.2-201ENST00000543664 586 ntBASIC17.56■□□□□ 0.4
CASC4Q6P4E1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.56■□□□□ 0.4
CASC4Q6P4E1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.56■□□□□ 0.4
CASC4Q6P4E1 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 AC105020.1-201ENST00000435356 2205 ntBASIC17.55■□□□□ 0.4
CASC4Q6P4E1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 KRT18P1-202ENST00000452408 1331 ntBASIC17.55■□□□□ 0.4
CASC4Q6P4E1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 SLC25A1P3-201ENST00000395415 828 ntBASIC17.55■□□□□ 0.4
CASC4Q6P4E1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 AC091607.1-201ENST00000490318 1060 ntBASIC17.55■□□□□ 0.4
CASC4Q6P4E1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 STK25P1-201ENST00000585406 838 ntBASIC17.55■□□□□ 0.4
CASC4Q6P4E1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms