Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 NUS1P2-201ENST00000417358 873 ntBASIC15.68■□□□□ 0.1
NIPAL3Q6P499 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 AC093525.9-201ENST00000624961 1746 ntBASIC15.68■□□□□ 0.1
NIPAL3Q6P499 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NIPAL3Q6P499 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 POM121L3P-201ENST00000419331 1163 ntBASIC15.67■□□□□ 0.1
NIPAL3Q6P499 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 FOSL1P1-201ENST00000511041 816 ntBASIC15.67■□□□□ 0.1
NIPAL3Q6P499 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 PRELID1P1-202ENST00000567272 903 ntBASIC15.67■□□□□ 0.1
NIPAL3Q6P499 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 AC011467.2-201ENST00000598425 242 ntBASIC15.67■□□□□ 0.1
NIPAL3Q6P499 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.67■□□□□ 0.1
NIPAL3Q6P499 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 AC092053.1-201ENST00000605787 1936 ntBASIC15.66■□□□□ 0.1
NIPAL3Q6P499 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 RCN1P2-201ENST00000398357 915 ntBASIC15.66■□□□□ 0.1
NIPAL3Q6P499 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 AC122714.2-201ENST00000502787 707 ntBASIC15.66■□□□□ 0.1
NIPAL3Q6P499 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPAL3Q6P499 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms